Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1027 ATGGCTAATTCGGCTGAACCCTCATCGTCTTTGAGCAATAATACATCATCGTCACACTTGTCAAATGGATCCATTAGTCACAACATATGCCCTAATGGCTCCGATCATGCTCGTAACCTCGAGGTTATAAGTTTGAATAAGCTGAGTTCTAATTTGGAGCAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCCGATATCATTGTGGAGGGAATTCCGGTGAGAATTCATCGGTGTATTCTAGGTTCTAGAAGTAAGTTTTTCCATGAAATATTTAAGAGGAGTAAAGATAAAGGATTGTCGAAGAATGAAGGGAGATTGAAGTATTGTTTGAGTGATTTGTTGCCTTATGGCAAAGTTGGTTATGAAGCTTTTCTTATATTCTTGAGCTATGTATATAGTGGTAAACTTAAACCCTCTCCAATGGAGGTGTCTACATGTGTTGATAATGTTTGTGCTCATGATGCTTGCGGACCTGCAATTAATTTTGCTGTGGAGTTAATGTATGCCTCTTCCATTTTTCAAATACCAGAGTTGGTATCACTTTTCCAGAGACGTCTTCTTAACTTTGTCGGGAAGGCTCTTGTGGAAGATGTCATTTCAATCCTTATGGCTTCTTTCCATTGTCAATTGAATCAACTCGCCGCTCAATGTGTTGACAGGGTGGCACGATCGGACCTTGACCAGATCTCAATTGAGAAAGAGCTTCCCCATGAGCTCTCGGAAAAAGTTAAATTGCTCCGCCGCGACCTTCATCAGAATGACGAAAACGATGCTCCTGTAGTGGACACTTTGTCCCTAAAACGAATTACTAGAATTCACAAGGCATTGGACTCGGACGACGTCGAGCTTGTTAAACTTCTTTTAAACGAGTCAGACATTACTTTAGATGAAGCCGGTGCTCTCCACTATGCAGTAGCCCACTGTGACCCTAAGGTTGTTTCTGAAGTCCTTGGATTGGGTTTGGCTAATGTCAATCTTCGGAATTCTCGAGGGTACACAGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTATCGCTTCTTACGAAAGGGGCTTGTGCATCGGATTTGACTTTTGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACGAGGCCAAAGGATTATCACACAAAAACAGAACAAGGGAAAGAAACAAATAAAGACCGGATATGCATTGATGTTCTTGAAAGAGAAATGCGAAGGAATCCTTTGGCTACAGATCCCTCTGTGTCTTCCCACACAGTGGCTGATGATCTCCACATGAAGCTTTTGTACCTTGAGAACAGAGTGGCATTTGCAAGACTATTCTTCCCTTTGGAAGCCAAACTAGCCATGGACATTGCACGTGCGGAGACAACATCCGAGTTTGCTGGTCTTTCGGCATCAAAAGGTTCCAATGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCCATAATGCAAAACAAGAGACTTATTTCTAGGATGGAAGCCCTAATGAAAACAGTCGAGATGGGGCGGCGCTACTTTCCTCATTGCTCGGAAGTGCTCGACAAGTTCATGGAGGATGACCTACCTGACTTGTTTTACCTTGAGAAGGGCACCCAAGAAGAGCAAAGAGTCAAGAGGACGAGATTCGTTGAGCTTAAAGATGATGTCAACAAGGCTTTCAGCAAAGACAAAGCTGAGTTTAGTCGCTCTGGGATTTCCTCTTCATCATCCTCTTCATCCCTTAGAGAGTCTGTATATTATAAGGCTAGAAAAATGTAA 1770 0.4249 MANSAEPSSSLSNNTSSSHLSNGSISHNICPNGSDHARNLEVISLNKLSSNLEQLLIDSDYDYGDADIIVEGIPVRIHRCILGSRSKFFHEIFKRSKDKGLSKNEGRLKYCLSDLLPYGKVGYEAFLIFLSYVYSGKLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQIPELVSLFQRRLLNFVGKALVEDVISILMASFHCQLNQLAAQCVDRVARSDLDQISIEKELPHELSEKVKLLRRDLHQNDENDAPVVDTLSLKRITRIHKALDSDDVELVKLLLNESDITLDEAGALHYAVAHCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLATDPSVSSHTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLSASKGSNGNLREVDLNETPIMQNKRLISRMEALMKTVEMGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTQEEQRVKRTRFVELKDDVNKAFSKDKAEFSRSGISSSSSSSSLRESVYYKARKM* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1027 589 Gene3D - 266 406 IPR036770 -
Mtr2g1027 589 CDD BTB_POZ_NPR_plant 46 192 - -
Mtr2g1027 589 Pfam BTB/POZ domain 62 181 IPR000210 GO:0005515
Mtr2g1027 589 SUPERFAMILY Ankyrin repeat 264 375 IPR036770 -
Mtr2g1027 589 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g1027 589 ProSiteProfiles Ankyrin repeat region circular profile. 332 357 - -
Mtr2g1027 589 SMART ANK_2a 332 364 IPR002110 GO:0005515
Mtr2g1027 589 SMART ANK_2a 298 328 IPR002110 GO:0005515
Mtr2g1027 589 SMART ANK_2a 269 297 IPR002110 GO:0005515
Mtr2g1027 589 ProSiteProfiles BTB domain profile. 64 142 IPR000210 GO:0005515
Mtr2g1027 589 PANTHER REGULATORY PROTEIN NPR3 10 578 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mtr2g1027 589 SUPERFAMILY POZ domain 60 190 IPR011333 -
Mtr2g1027 589 Pfam Ankyrin repeats (many copies) 301 346 IPR002110 GO:0005515
Mtr2g1027 589 ProSiteProfiles Ankyrin repeat profile. 332 357 IPR002110 GO:0005515
Mtr2g1027 589 SMART BTB_4 64 192 IPR000210 GO:0005515
Mtr2g1027 589 Gene3D Potassium Channel Kv1.1; Chain A 34 224 IPR011333 -
Mtr2g1027 589 Pfam NPR1/NIM1 like defence protein C terminal 374 576 IPR021094 -
Mtr2g1027 589 PANTHER REGULATORY PROTEIN NPR3 10 578 - -
Mtr2g1027 589 MobiDBLite consensus disorder prediction 561 589 - -
Mtr2g1027 589 Pfam Domain of unknown function (DUF3420) 227 275 IPR024228 -
Mtr2g1027 589 MobiDBLite consensus disorder prediction 564 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1027 Mtr-Chr2 10843243 10848461 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr2g1027 NPR1_like_C 2.7e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1027 K14508 - gmx:100217338 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g1027 2 10843243 10848461 Mtr2g1027 2 10843243 10848461 ECH