Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1017 ATGATGACCGACGATGCAGCGTGTTCTCCAAATGATAAAGGATTGTCGCTGAGCCCTAATCTGGACATCACGATAGATGAGGGATCTCCACAAAGTAAGCAACTACTTGAGCTTGAAAATGGAAGGGAGGAAACCACGGGAGTTGACAGTCATAGTGAAGAATCTCAAAGAACAAATGACTACGCCCAACCTGTTGAGGGATTGGAGTTTGAAACTTATGATGATGCCTACAACTATTATAATAGCTATGCCAGGGATATTGGATTTGCTATTCGGGTTAAATCTTCGTGGACCAAACGTAACAGTAAAGAGAAGCGTGGTGCTGTCTTGTGTTGTAGCTGTGAAGGTTTCAAAACAATTAAAGAAGCTAATAGTCGTAGGAAAGAAACACGAACAGGCTGTCTAGCAATGATTAGATTGAGAGTAGTGGAATCTAATAGGTGGAGGGTGGATGAAGTCAAGCTTCAGCATAACCATTCATTTGATCCTGAAAGACCGCAAAACTCTAAATCACATAAGAGGATGGACAGTGGGGCCAAAAGAAAGGTTGAGCCGACTCTAGATGTTGCTGTACGGACAATCAAGTTATATCGAATGCCAACTGTAGATGTTTCCGGTTATGGGAGCTCAAATTCTAATGAAGGAGGAACTAGCACCAACGTTAAATTTTCCAGGAGACTGAAGCTAAAAAAAGGTGATGCAGAACTTGTTTCAAATTACTTCTGCCACCGTCAACTGGGGAGTCCTAATTTTTTCTATTTGATGGATCTGAATGATGATGGACAACTGAGGAACATATTTTGGATTGATTCTAGATCTAGGGCTGCATATAGTTATTTTAGTGATGTGGTTGCATTTGACTCAACATATTTGTCAAACAATTATGAGATTCCACTAGTTGCATTTGTTGGTGTTAATCACCATGGTCAATCTGTTTTGCTAGGATGTGGTCTGCTTGCAGATGAGACATTTGAAACGTATACCTGGTTATTTAGAGCATGGCTTACTTGTATGTCTAGTCGCCCTCCAGAAACTATTGTTACAAACCACTGTAAGACCATAGAATGTGCAATAGTAGAGGTTTTCCCGAGGGCTCGCCATAGAATTTTTCTATTGCAAGTCTTGCAGAGCATCCATGGATGTCTGGTGCAGTTTCAGGAAGATGTGGCATTTCAGATGGCACTGACAAGAGCGATATATGACCCTAAAACAGTAGATGAATTTGAAAGAGATTGGGATTCTCTGACCCAACATTATGGAATAAGAAATCATGCAAAGCTCCGAAGCTTGCACGAGGACAGAGAGCTTTGGGCTCCAGTTTACTCCAAGGACACATTTTTTGCTGGAATTTCTAATTACGAAAAGGGTGAGTCTACGATTCCCTTTTTTAAGGGTCATGTGCATCAACAAACTTCTTTGAAAGATTTTTTTGAGATTTATGAATTAGTTCAACAAAAAAAGCAAAAAACTGAAGCTCTTGATGATTTGGAGTCACAAAATTCAAGCCCGCAACTGAAATCAAGATGCCACTATGAGTTGCAACTCTCTAAATTGTACACAAATGCAATATTCAGTAAGTTCCAAGATGAGGTGGTGATGATGTCTTCCTGTTTCAGCGTCTCACAAAATCAAACAAACGAGTCTACAGTGACATACATGGTAAAAGAACATCAAGGGGAAGAACCGGTAAGAAATGATAGACATTTTGAAGTCATGTATGATAAAGCATTAACCGAAGTACGTTGCATTTGTAATTGCTTTAACTTCAAAGGCTACCTATGCAGGCATGCCTTGTATATCCTTAATTACAATGGTGTGGGGGAAATTCCATGTCATTATATTTTGTCAAGATGGAGGAAAGATTTTAAGCGATTGCATGTACCACATCTCAGCTCTGACGATGTTGATATTACCAATCCAGTTCAGCATTTTGATCATTTGCACAAACGTGGTATGCAAGTAGTTGAAGAAGGCATGATATCCCAAAATCATTACTTGGCTTCTTGGCAGGCATTTAGAGGGTCTTTAAATAAGATTCACCTTGTAGCAAACAAAATTGAATAA 2064 0.3953 MMTDDAACSPNDKGLSLSPNLDITIDEGSPQSKQLLELENGREETTGVDSHSEESQRTNDYAQPVEGLEFETYDDAYNYYNSYARDIGFAIRVKSSWTKRNSKEKRGAVLCCSCEGFKTIKEANSRRKETRTGCLAMIRLRVVESNRWRVDEVKLQHNHSFDPERPQNSKSHKRMDSGAKRKVEPTLDVAVRTIKLYRMPTVDVSGYGSSNSNEGGTSTNVKFSRRLKLKKGDAELVSNYFCHRQLGSPNFFYLMDLNDDGQLRNIFWIDSRSRAAYSYFSDVVAFDSTYLSNNYEIPLVAFVGVNHHGQSVLLGCGLLADETFETYTWLFRAWLTCMSSRPPETIVTNHCKTIECAIVEVFPRARHRIFLLQVLQSIHGCLVQFQEDVAFQMALTRAIYDPKTVDEFERDWDSLTQHYGIRNHAKLRSLHEDRELWAPVYSKDTFFAGISNYEKGESTIPFFKGHVHQQTSLKDFFEIYELVQQKKQKTEALDDLESQNSSPQLKSRCHYELQLSKLYTNAIFSKFQDEVVMMSSCFSVSQNQTNESTVTYMVKEHQGEEPVRNDRHFEVMYDKALTEVRCICNCFNFKGYLCRHALYILNYNGVGEIPCHYILSRWRKDFKRLHVPHLSSDDVDITNPVQHFDHLHKRGMQVVEEGMISQNHYLASWQAFRGSLNKIHLVANKIE* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1017 687 MobiDBLite consensus disorder prediction 13 36 - -
Mtr2g1017 687 Coils Coil 679 687 - -
Mtr2g1017 687 ProSiteProfiles Zinc finger SWIM-type profile. 569 605 IPR007527 GO:0008270
Mtr2g1017 687 Pfam MULE transposase domain 283 369 IPR018289 -
Mtr2g1017 687 MobiDBLite consensus disorder prediction 37 56 - -
Mtr2g1017 687 MobiDBLite consensus disorder prediction 1 64 - -
Mtr2g1017 687 SMART 26again6 580 607 IPR006564 GO:0008270
Mtr2g1017 687 MobiDBLite consensus disorder prediction 159 181 - -
Mtr2g1017 687 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 36 683 IPR031052 GO:0006355
Mtr2g1017 687 Pfam FAR1 DNA-binding domain 78 162 IPR004330 -
Mtr2g1017 687 Coils Coil 479 499 - -
Mtr2g1017 687 PANTHER PROTEIN FAR1-RELATED SEQUENCE 8 36 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1017 Mtr-Chr2 10714265 10717347 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g1017 MULE 1.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1017 K17604 - gmx:100796448 1115.14