Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1016 ATGTCGGAGTTGGAGGGCGAAAAGCTCGTTACCTTGGACGGCGTCGATTCTCAACAACGTCAAGGAGAAGAAGAAGAAGAAGAAGAAGGAGGAGGCTTGAAGGTGGACGACATTTCTGTGTGTTATGACCAATTACCCGATAAAGAATGCCAGGTAATTGAATTAGATTGTCAAAATGATATCTCTGAAGGAAGAAAAGAATTTCCCGCACCTGCTCTTGCTATGGAATTTGAGTCATATGATGATGCTTACAGTTATTATATTTGTTATGCCAAGGAGGTGGGATTTTGTGTGAGGGTTAAGAATTCATGGTTCAAGCGAAATAGCAAAGAAAAATATGGTGCAGTGCTTTGTTGTAGCAGCCAAGGTTTCAAAAGAACAAAAGATGTTAACAATTTGAGAAAAGAAACCAGAACTGGTTGTCCTGCCATGATAAGGATGAAGTTAGTGGAATCTCAGAGATGGAGGATATGCGAGGTTACTCTCGAACATAACCACGTCTTAGGTGCTAAGATACATAAATCCATTAAAAAGAACTCGTTGCCTAGTTCTGATGCGGAAGGGAAAACTATTAAGGTATATCATGCACTTGTGATAGATACAGAAGGTAATGACAATTTAAACTCCAATGCAAGAGATGACAGAGCTTTCTCCAAATATTCTAATAAGTTGAACCTGAGAAAAGGTGACACACAAGCCATTTATAATTTCCTCTGCCGTATGCAATTGACTAATCCAAACTTCTTTTATTTGATGGATTTCAATGATGAAGGGCATTTAAGGAATGCATTATGGGTTGATGCTAAGTCCAGGGCTGCATGTGGTTATTTTAGTGATGTCATTTATTTTGACAACACTTATTTGGTAAACAAATATGAAATCCCTCTTGTGGCTTTAGTTGGAATAAATCACCATGGTCAATCAGTTTTATTAGGTTGTGGCCTGCTTGCAGGTGAAATTATAGAATCATATAAATGGTTGTTTAGAACATGGATCAAATGTATACCAGGATGTTCTCCTCAAACTATTATTACAGATAGATGCAAAGTTTTGCAGAGTGTAATTGCTGAAGTCTTTCCCAGATCTCATCATTGCTTTGGATTGTCATTAGTTATGAAAAAAGTACCAGAAAAACTGGGAGGGTTGCACAATTATGATGCAATCAAGAAAGCGCTGATAAAAGCAGTTTATGAGACATTGAAAGTGATTGAATTCGATGCAGCATGGGGATTCATGATTCAACATTTTCGAGTTAATGATAATGAGTGGCTTTGTTCACTATATGAAGACCGAGTTCATTGGGCACCAGTATATTTGAAGGACAAGTTTTTTGCTGGAATGTTTGCAACACGGTCTGGGGAAAGCATTAGTCCATTTTTCGATAAATATGTCCACAAACAGACTCCTTTGAAGGAGTTTCTTGACAAGTATGAATTAGCTCTTTACAAGAAGTACAAGGAAGAATCTCTTGCAGATATTGAATCGAGAAGCTCAAGCCCTTTGCTAAAAACCAAATGCTCTTTTGAACTGCAGCTCTCTAGTATGTACACAAGAGAATTATTCACCAAGTTCCAACTTGAAGTGGAAGAAATGTTCTCTTGTTTTGGGACAATGCAGTTACACGTGGATGGCCCTATCATCGTCTTCTTGGTCAAGGAGCGCGTTTTGATCGAGGGAAACAAACGGGAAATTAAGGATTTTGAAGTTGTGTATAGTAAAACATCAGGTGAAATTCGTTGTATCTGTTGTTGCTTTAATTTTTATGGATATCTTTGTCGGCATGCGTTGTGTGTGCTCAATTTTATTGGGGTGGAGGAGATTCCTCCTAAGTACATTCTTTCGCGGTGGAATAAAGATTACAAGCGCTTCTGTATTCCCGATCACAACTGCTGTAGTTCTGATGATACTGATACTGACCCTATTCAATGGTCTAATCGGTTATTTAGAAGTGCCTTACAAGTTGTGGAGGAAGGAGTAATTTCTCTGGACCATTACAAGGTAGCGTTGCAGGCTTTGGAAGAATCACTTCATCAGGTTCGTGATGTAGAACACAAACAGGAGTAA 2064 0.3852 MSELEGEKLVTLDGVDSQQRQGEEEEEEEGGGLKVDDISVCYDQLPDKECQVIELDCQNDISEGRKEFPAPALAMEFESYDDAYSYYICYAKEVGFCVRVKNSWFKRNSKEKYGAVLCCSSQGFKRTKDVNNLRKETRTGCPAMIRMKLVESQRWRICEVTLEHNHVLGAKIHKSIKKNSLPSSDAEGKTIKVYHALVIDTEGNDNLNSNARDDRAFSKYSNKLNLRKGDTQAIYNFLCRMQLTNPNFFYLMDFNDEGHLRNALWVDAKSRAACGYFSDVIYFDNTYLVNKYEIPLVALVGINHHGQSVLLGCGLLAGEIIESYKWLFRTWIKCIPGCSPQTIITDRCKVLQSVIAEVFPRSHHCFGLSLVMKKVPEKLGGLHNYDAIKKALIKAVYETLKVIEFDAAWGFMIQHFRVNDNEWLCSLYEDRVHWAPVYLKDKFFAGMFATRSGESISPFFDKYVHKQTPLKEFLDKYELALYKKYKEESLADIESRSSSPLLKTKCSFELQLSSMYTRELFTKFQLEVEEMFSCFGTMQLHVDGPIIVFLVKERVLIEGNKREIKDFEVVYSKTSGEIRCICCCFNFYGYLCRHALCVLNFIGVEEIPPKYILSRWNKDYKRFCIPDHNCCSSDDTDTDPIQWSNRLFRSALQVVEEGVISLDHYKVALQALEESLHQVRDVEHKQE* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1016 687 SMART 26again6 578 605 IPR006564 GO:0008270
Mtr2g1016 687 Pfam MULE transposase domain 280 374 IPR018289 -
Mtr2g1016 687 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 43 683 IPR031052 GO:0006355
Mtr2g1016 687 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g1016 687 ProSiteProfiles Zinc finger SWIM-type profile. 567 603 IPR007527 GO:0008270
Mtr2g1016 687 Pfam FAR1 DNA-binding domain 86 168 IPR004330 -
Mtr2g1016 687 Pfam SWIM zinc finger 576 600 IPR007527 GO:0008270
Mtr2g1016 687 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 43 683 - -
Mtr2g1016 687 Coils Coil 662 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1016 Mtr-Chr2 10708182 10710967 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g1016 MULE 8e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1016 K17604 - gmx:100796448 1071.61