Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0999 ATGGCTCGTTTCTCCTTGCCGGTCCTCCTTTACTCCACCGCCACTTCCCGTCGCTTCTCGTCCGACTCAATGCAACAGCAGCTGCGCAACGTCTGGATCTCGGGGCTCCTTGACCCTTCCAAGGTGAGGGTGACGGAGAGGTACTGGTTATACACGGGGGATATTGATAAGATGATAGAAGCTAGGAAAGAAACCGAGAAAAGAGACAAGTACTATGAGTCTATTGTAAAAGAAGAGTCGTGGTTGAATCAGGGTAAAAAACGAGATAGCCGTAGACATTTTAAATGGCTTATGAATGGTCCAACTTCCGATTCTACTTCCGCAGATCTCACTTTCTTCAACTGGAGGAAACAATATAAGATGAGTGTGCTTGACACACCTGATAATGTTGATTTCACTGCTGAGGTTCAGAATGCTCTGCGTGCCTTTGACGGTGCCATTCTTGTTCTTTCTGGTGTTGATGGGGTGAACAGCCACTCCATTTCTGTTGATAAACAAATGATGGGATATGAACTTCCAAGACTTGTTTTTATCAACAATCTTGACCATAAGGGAGCAAATCCATGGGGAGTTTTATATCAGGCAAGATCCAAGCTTCAACATCATATTGCTGCAGTCCAAGTTCCAATAGGCTTGGAATATAATTTTAAGGGACTTGTTGATCTTGTGCACTTAAAGGCCTACTTTTTTCATGATTCAAATGGACAAAAGGTTTTCGTTGAAGAAGTTCCTGGATATATGGAAGCCTTGGTGTCACAGAAAAGGCGTGAACTTATAAAAACTGTGTCCGAGGTGGACGATAAACTTGCAGAAGCTTTCAGTGGTGACAAGCCCATCTCAGCAGCTGATCTTGAGGAAGCAGTTCGTAGGGCCACCATAGCACGGAAGTTTATACCAATATTCATGGGCAGTGCTTTCAAGTATAAGGGGCTACAACTACTTTTGGATGGTGTACTTAATTATTTGCCGTGTCCAACTGAAGCTAGTAATTATGCTCTCGTCCAATCTAAGAATGAGGAAAAGGGTACACTTGTGGCGCTGGCTTTCACTTTAAAGAGAAAGTATGATCTACTAACATATCTAAGAATCTACGACGGCATCGTTAGGAAAGGGGATTTTATCACAAACGTTGACACTGGCAAGACGTTCAAGGTTCCTGATTCAATTGAAATGCGAAAAGATGAGATCGGGGTTCCTCATCCGCTTCAACTGCGAGTGGATAAGAAGGGGGTTCCTTATGTGATTGGGTTGCGTAATGAGGTTCCTTATTCAACTGAGCCGCGGAAGGATGATTTGGGGGTTCCTCTTTTGATTGGGTTGAGTTATCATGAGGCGATCCAAGTGGCTCGTGCTGGAGAAATAGTCGCTGTACATGATCCCCTTAGTGCACCAGGTGATACTTTTACCGATGGGTTGGTAAGATATACAAAGTCTTCTGTTGATGTTTCTGAGCTGATCTCAAGAGATTCTGGAGTGCAAGTTTCAGAAGTTTAG 1494 0.4378 MARFSLPVLLYSTATSRRFSSDSMQQQLRNVWISGLLDPSKVRVTERYWLYTGDIDKMIEARKETEKRDKYYESIVKEESWLNQGKKRDSRRHFKWLMNGPTSDSTSADLTFFNWRKQYKMSVLDTPDNVDFTAEVQNALRAFDGAILVLSGVDGVNSHSISVDKQMMGYELPRLVFINNLDHKGANPWGVLYQARSKLQHHIAAVQVPIGLEYNFKGLVDLVHLKAYFFHDSNGQKVFVEEVPGYMEALVSQKRRELIKTVSEVDDKLAEAFSGDKPISAADLEEAVRRATIARKFIPIFMGSAFKYKGLQLLLDGVLNYLPCPTEASNYALVQSKNEEKGTLVALAFTLKRKYDLLTYLRIYDGIVRKGDFITNVDTGKTFKVPDSIEMRKDEIGVPHPLQLRVDKKGVPYVIGLRNEVPYSTEPRKDDLGVPLLIGLSYHEAIQVARAGEIVAVHDPLSAPGDTFTDGLVRYTKSSVDVSELISRDSGVQVSEV* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0999 497 Gene3D - 19 327 IPR027417 -
Mtr2g0999 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 323 IPR027417 -
Mtr2g0999 497 SUPERFAMILY Translation proteins 309 393 IPR009000 -
Mtr2g0999 497 Pfam Elongation factor Tu GTP binding domain 27 323 IPR000795 GO:0003924|GO:0005525
Mtr2g0999 497 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 20 494 IPR045044 -
Mtr2g0999 497 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 20 494 - -
Mtr2g0999 497 Gene3D Translation factors 328 477 - -
Mtr2g0999 497 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 26 326 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0999 Mtr-Chr2 10535154 10545210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0999 118 182 Eukaryotic Initiation Factors Gene Family AT1G56070 33.846 1.93e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0999 K02355 - tcc:18614400 419.083