Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0980 ATGTATCATCCAACTAATGTTCCTGATTCGAGTTTAGTTGGAAGCAATCCATTAGTTCATGGTCAGCATATAGATTCTGGTAGGAGCGCAATGGATCCTGGTAGTGGAGGAAACAGTCTTGCCAACAACTCTAATCTCAACTCAAAGCAACGCTTGCGTTGGACGCATGAGCTACATGAACGCTTTGTTGATGCTGTGGCTCAACTTGGTGGCCCCGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTAACCATTTACCATGTCAAGAGCCATTTGCAGAAATACCGACTAGCAAAATACTTACCTGACTGCTCATCCGATGAGGGGAAAAAGACTGACAAGAAAGAAACGGGGGATATGCTTTCCAATCTAGATGGTTCATCAGGTATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTACAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAGCTACAATTAAGGATAGAAGCTCAGGGAAAATATTTGAAAAAGATAATCGAAGAGCAACAGCGACTCAGTGGGGTTCTTTCAGAAGCACCCGGCTCTGGTGTATCAGCACCAACTCCAGGAGATATGTTCCAACAGGAGCTTGACAATAAGACTGAACCAGCAACCCCCGACCCAGAAAAAGCTGCTAAAGAGCATGCACCAGCAAAGAGTCTTTCAGCTGAATCTTTTTCATCTCACCATGAACCGATGACACCAGATTCTGGTTGCCAAGTCGGTTCTCCTGCTGACAGTCCTAATGGTGAGAGATCAACTAAAAAGCAACGAGTAAGCGTGGAAGGAGCATATTTGAAATCAGACATGGTGCTTCCTCATCAGATACTGGAGTCAAGCATGCCGTCATACCAGCAACCAAACGCTATTTTCCTTACCCAAGATCACTTTGATCCTTCTTTAGGTTTGTCTACAAGAAGTGGTGAGGAATTGGATAAGCTTGGTGGCAGGAATATGTGA 993 0.4502 MYHPTNVPDSSLVGSNPLVHGQHIDSGRSAMDPGSGGNSLANNSNLNSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGKKTDKKETGDMLSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGVSAPTPGDMFQQELDNKTEPATPDPEKAAKEHAPAKSLSAESFSSHHEPMTPDSGCQVGSPADSPNGERSTKKQRVSVEGAYLKSDMVLPHQILESSMPSYQQPNAIFLTQDHFDPSLGLSTRSGEELDKLGGRNM* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0980 330 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 188 272 - -
Mtr2g0980 330 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Mtr2g0980 330 Pfam MYB-CC type transfactor, LHEQLE motif 136 182 IPR025756 -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 311 330 - -
Mtr2g0980 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 322 - -
Mtr2g0980 330 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 322 IPR044848 GO:0003700
Mtr2g0980 330 MobiDBLite consensus disorder prediction 111 132 - -
Mtr2g0980 330 Coils Coil 139 159 - -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 1 45 - -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 232 261 - -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 213 228 - -
Mtr2g0980 330 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mtr2g0980 330 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 1 17 - -
Mtr2g0980 330 MobiDBLite consensus disorder prediction 111 126 - -
Mtr2g0980 330 Gene3D - 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0980 Mtr-Chr2 10286428 10294573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0980 84 330 G2-like Transcription Factor Family AT2G01060 62.646 1.09e-89 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mtr2g0980 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0980 - - gmx:100786925 514.227