Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0943 ATGGACAGCATGAACCTCCTCGCCGCCGACCATGTTGCTCCATTTCCCGACTCCGGCGACCTTATCTTCGCCGCCGGCCTCCTCTCCAACCACCACAATCCCCAAAAACTCATCCCCATCAGGTCCATCCCTCCCCCTCCTCCTCCTCCTGGTTTCCCTGCTCATCACTCCCCTCCACCACCTTCCGTAAAGGTCGAGGACCCGTCTCGATCCGGGTCGGGTCATTCTTCGTTGCCCCTTTGTCAAGAACCCGGCTCGTCTTCGGATGATGTGGGCAATTCATCTGCCAGTACTAAAGAATTTGGCTCAAGAAAGAGAAGGAGAAAGAGTTCGAGAAAGCTGGAAGATTTTGCAGCAAATTTGGTAAAGAAGATGACGGAAAAGCAAGAGCAGATGCATAAAGAAATGGTGGAAATGATTGAGAGGATGGAAAAGGAAAGGATAAAGAGAGAAGAAGCATGGAAGCGCGAGGAGATGGAGAGAATTAAGCAGGACGAAGAAGCTAGAGCGGCTGAGAGGTCTCGTAGTTTAGCCCTCATATCGCTGATTCAGAAACTATTGGGTTATGAAATTCAGATTCCTCCACCAGCAGAAGGAAGCGGAATAAGAGAAGAGGATGAAGTTGAGGTGAACAACAACAACAACAGCCCACCCTTAACCCACAACATGGGGTCGGCTGAGGTGAACAACAACACCAACAGCCTAGCCTTAATCCAGTACGTGGGGCCGGCTGAGGTGAGGAATAAAAGAAAAGATTTCAACAGCAGCGATCCAAGTAACAATAGATGGCCAGATGTGGAAGTACAAGCGCTCATAGCAGTAAGAACCGCATTGGAACACAAGTTCGGTCATATGGGATCGAAAGGATCAATATGGGAGGAGATAGCTGGAGCATTGCAGGGCATGGGATACAATCGTTCTGCGAAGAAGTGCAAGGAGAAATGGGAAAACATCAATAAGTACTATAGGAGGACAGTGGGGAGCGGCAAGAAACGGCCTGTTAATAGCAAAACTTGCCCTTACTTCGATGAATTGGACAATCTGTATAGAAATGGGTCCTTGGAGAGAAATGGAAATGCATTGAGCAGTACCAACAATGTTTCCATAAGGGAAGAAAAGGAGCAGGGTGAAATTTCATAA 1140 0.4816 MDSMNLLAADHVAPFPDSGDLIFAAGLLSNHHNPQKLIPIRSIPPPPPPPGFPAHHSPPPPSVKVEDPSRSGSGHSSLPLCQEPGSSSDDVGNSSASTKEFGSRKRRRKSSRKLEDFAANLVKKMTEKQEQMHKEMVEMIERMEKERIKREEAWKREEMERIKQDEEARAAERSRSLALISLIQKLLGYEIQIPPPAEGSGIREEDEVEVNNNNNSPPLTHNMGSAEVNNNTNSLALIQYVGPAEVRNKRKDFNSSDPSNNRWPDVEVQALIAVRTALEHKFGHMGSKGSIWEEIAGALQGMGYNRSAKKCKEKWENINKYYRRTVGSGKKRPVNSKTCPYFDELDNLYRNGSLERNGNALSSTNNVSIREEKEQGEIS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0943 379 Pfam Myb/SANT-like DNA-binding domain 261 348 IPR044822 -
Mtr2g0943 379 MobiDBLite consensus disorder prediction 354 379 - -
Mtr2g0943 379 Gene3D - 263 324 - -
Mtr2g0943 379 ProSiteProfiles Myb-like domain profile. 255 319 IPR001005 -
Mtr2g0943 379 CDD GT1 261 325 - -
Mtr2g0943 379 MobiDBLite consensus disorder prediction 69 99 - -
Mtr2g0943 379 Coils Coil 126 146 - -
Mtr2g0943 379 MobiDBLite consensus disorder prediction 39 65 - -
Mtr2g0943 379 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 86 375 - -
Mtr2g0943 379 MobiDBLite consensus disorder prediction 36 114 - -
Mtr2g0943 379 PANTHER - 86 375 - -
Mtr2g0943 379 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0943 Mtr-Chr2 9789677 9792018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0943 105 353 Trihelix Transcription Factor Family AT5G47660 41.767 7.36e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr2g0943 Myb_DNA-bind_4 3.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0943 - - mtr:MTR_2g026725 674.47