Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0941 ATGGCTGAATCAGACAATGAGTCAGGAGGTGGTCAAACAGGTTGCAGAGAGCAAGATAGGTTTCTTCCAATAGCAAACGTGAGTAGGATCATGAAAAAGGCTTTACCAGCAAACGCAAAGATCTCAAAAGAAGCAAAAGAAACAGTACAAGAGTGTGTATCAGAGTTTATCAGTTTCATAACTGGAGAAGCTTCTGATAAGTGTCAGAAAGAGAAGAGGAAAACAATCAACGGTGATGATCTTCTTTGGGCTATGACAACTCTTGGATTTGAAGATTATGTTGAGCCACTCAAGATTTATTTGAGTAAGTATAGGGAGATGGAAGGAGAGAAGAGTGCTATGATTGGTAGGAGTGATCAGAGAGATGGGAATGTTGGTGAGGGTAGTGGTGGAGTTTATGGTCATGGAGTTGGAGTTCCATCTTCTATGATGATGATGATGGGACATAATATGTATGGATCTGGGAGTGGATCGCCATCTTCTGGAAGGAGTACTCGATAG 501 0.4152 MAESDNESGGGQTGCREQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKIYLSKYREMEGEKSAMIGRSDQRDGNVGEGSGGVYGHGVGVPSSMMMMMGHNMYGSGSGSPSSGRSTR* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0941 166 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 152 IPR027113 GO:0001228|GO:0006355|GO:0016602
Mtr2g0941 166 PRINTS CCAAT-binding transcription factor subunit A signature 49 67 - -
Mtr2g0941 166 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Mtr2g0941 166 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Mtr2g0941 166 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 21 85 IPR003958 -
Mtr2g0941 166 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y PROTEIN 1 152 - -
Mtr2g0941 166 Gene3D Histone, subunit A 11 128 IPR009072 GO:0046982
Mtr2g0941 166 SUPERFAMILY Histone-fold 18 127 IPR009072 GO:0046982
Mtr2g0941 166 ProSitePatterns NF-YB/HAP3 subunit signature. 52 68 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0941 Mtr-Chr2 9777703 9778639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0941 1 117 CCAAT-HAP3 Transcription Factor Family AT4G14540 84.298 2.86e-72 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Mtr2g0941 CBFD_NFYB_HMF 1.1e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0941 K08065 - gmx:100305641 223.787