Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0940 ATGGGAAATGTGAATGGAAGAGAAGAAGATTTCAATGGAACACTATCATCAGCTTCATCAACATCATCAGAAGTCAGTGATTCCATGTCTGCACCTGATGGGGTTGTTGAAAATCCTTCACCTGTTGAGTTAATGGGTCATTCTCCACCTGCTAGCCCTAGAACAACTCAATCTCCTTTAATGTTCACTCCTCAAGCTCCGGTGGTTCCACTACAAAGACCTGATGAGATGCAAGTTCCCAGCCCTTCCTTGATGCAAACTAATTCAGGGTATGAGGATATGTTCAGTGAAATTGGAATTCCGACGATGATTACATGGAGTTATGATGGTAAAGAAGTTGCTGTGGAGGGATCATGGGATAATTGGAAAACGAGGATGCCATTGCAGAGATCAGGAAAGGACTTCACTATAATGAAGGTGCTGCCATCTGGTGTTTATCAGTTTAGATTTATCGTGGATGGACAGTGGAGGTACGCACCTGACTTGCCTTGGGCTCGAGATGATGCTGCCAATACTTACAACATTCTTGACTTGCAGGATTCCGTTCCTGAAGACCTTGGAAGTATTTCTAGCTTCGAACCTCCAAAATCACCAGACTCTAGCTACAACAACTTACACCTAAGCTCTGAAGATTATGCAAAAGAACCGCCATTGGTTCCTCCATTCATGCAAGCGACTCTTCTTAATGTTCCTTCCGCAAATATGGAATTCCAACCTCTTGTATCCAGACCACAGCATGTAGTGCTCAATCATCTCTATATGCAGAAAGGAAAGAGCAGCCCTTCTGTGGTGGCACTCGGCTCGACTCATCGATTTGTAGCCAAATATGTCACTGTGGTGATGTACAAGTCTTTGCAGAGGTAA 864 0.4398 MGNVNGREEDFNGTLSSASSTSSEVSDSMSAPDGVVENPSPVELMGHSPPASPRTTQSPLMFTPQAPVVPLQRPDEMQVPSPSLMQTNSGYEDMFSEIGIPTMITWSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGQWRYAPDLPWARDDAANTYNILDLQDSVPEDLGSISSFEPPKSPDSSYNNLHLSSEDYAKEPPLVPPFMQATLLNVPSANMEFQPLVSRPQHVVLNHLYMQKGKSSPSVVALGSTHRFVAKYVTVVMYKSLQR* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0940 287 CDD E_set_AMPKbeta_like_N 101 177 - -
Mtr2g0940 287 SUPERFAMILY E set domains 100 179 IPR014756 -
Mtr2g0940 287 Pfam Glycogen recognition site of AMP-activated protein kinase 100 180 IPR032640 -
Mtr2g0940 287 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 287 IPR043554 -
Mtr2g0940 287 MobiDBLite consensus disorder prediction 9 29 - -
Mtr2g0940 287 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 213 283 IPR006828 GO:0005515
Mtr2g0940 287 SUPERFAMILY AMPKBI-like 182 284 IPR037256 -
Mtr2g0940 287 Gene3D Immunoglobulins 95 182 IPR013783 -
Mtr2g0940 287 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 287 - -
Mtr2g0940 287 Gene3D - 189 285 - -
Mtr2g0940 287 SMART AMPKBI_2 195 285 IPR006828 GO:0005515
Mtr2g0940 287 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0940 Mtr-Chr2 9758458 9762009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0940 99 180 Protein tyrosine phosphatase (PTP) family AT3G01510 32.955 9.04e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0940 K07199 - gmx:100777497 477.248