Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0932 ATGACTTCAAAAGACATATGGATTCGAAAACAACAATGTCCTTGTGGAGATTGGAAATGTTACATTACACATGAGGGTGATGATTCTGATGAAGGTTCTGCAGCACCAGAATCGATGAAAGCAGATAAAACACCTTCTGATATCATTACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAGCATTATGGCAATTTTGCCAGAAAGCATGGATTTTCCATGAGGAAAGCAAGATCTAGAATTAGCCCTCAATTAGGCGTTTACAAGCGTGATTTTGTTTGTTATCGGTCTGGGTTTGCCCCGGTTAAGAGGAAGGCAAATGGTGAGCATCATAGAGATAGGAAATCAGTGAGGTGTGGATGTGATGCTAAAATGTATCTGTCTAAGGATGTTGTTGATGGGGTTTCACAGTGGACTGTTCTGCAGTTTAGTAATGTGCATAATCATGAGCTTTTGGAAGATGATCAAGTGCGTCTTTTACCTGCTTATCGGAAGATTCATGAGGCTGATCAAGAGCGTATACTCTTGCTTTCAAAAGCTGGGTTTCCGGTACACCGGATAGTGAAAATGCTTGAGCTTGAAAAGGGAATTCAAGGTGGACATTTGTCTTTCTTGGAAAGGGATGTGAGGAACTTTGTGCAAAATCGAAAGAAGGTTATTCAGGAGAATGAGGCATTGCTTAATGAGAAAAGGGAAAATGATGTTTTGGAACTTCTTGAGGTGTGCAAAGCCACGAAAGAAGCGGATGATGACTTTGTTTATGATTTTACCATGGATGAGAATGAGAAGGTTGAAAATATAGCTTGGTCATATGGTGATTCTGTTAATAAGAATGTGGTGTCTGGTGATGTAATTTATTTTGACACTTCTTATCGATCGATCACTTATGGATTGCTTCTTGGAGTGTGGTTTGGCATCGATAGTTGTGGTAGAACTATTTTCTTCGGTTGTGTTTTATTGCAGGACGAAACACCACAATCTTTTTCATGGGCGTTACAGACGTTTCTCCAGTTCATGAAAGGAAGATGTCCACAAACAATTTTATCTGACCTTGACCCCGGGCTTAGAGATGCCATTAAAAGCGAATTTTCTGGGACTAAACACGTCGTTCCGATGTGGAATATTCTAAACAAGGTATCTAGTTGGTTTTGTCTTCCTCTTGGGCCTCGTTATGCTGAATTTAAATCCACGTTCAATGCCTTATTCCACATTGAGAAAACAGAGGAATTTGAACTTAAATGGAGCCAAATGGTTTCTGTTTTTGGACTTGGTTCAGATAAACATATTGATCTACTGTATTCGGTTCGACCATATTGGGCACCGTCCTATGTGAGAGGTTTTTTTTTGGCTCGAATGTCAACAATAGCTTATTCCAAGTCTATAAATGCTTTTATGAAAGAGATCGTCACCGAACATACATGTTTGCGCAGCTTTTTTGAACAGCAAGAGTTGGTGCTGACAATGCAATATGCTACATCTGAGCTGTATAACGGATCATATATTATACGACACTTCAAAAAGTTGGATGGAGAGCGACACGTGTTATGGCTACCAGAAAAGGAACAAATACTCTGCTCTTGCAAGGAATTTGAATCATCAGGAATATTATGCAGACACGCTCTTCGTATACTTGTAACAAAGAATTACTTTCAGCTTCCCGAAAAATACTACTTAAGCAGATGGCACCGAGAACGTTCTTTAATTGTGGAGGATGAGCATAACAACCAAAGTTTTATTGCTGAGAAATGGTTTCAAGAATATCAGTCCCAAGCTGAAAATTTATTTTCAGAATCATCAATTACAAAGGAGCGATCTGACTATGCTCGCAAAGAACTGATGAAAGAACTTACTAGGATTCTTAATGAGGTTAGAGATATGTCTGAGACCGATGGAGTCGAGACCGATGGAATCTGCAGCATGAATGTGGCAGTTTCACCAAATAGCTAG 1959 0.3946 MTSKDIWIRKQQCPCGDWKCYITHEGDDSDEGSAAPESMKADKTPSDIITPYVGMVFKSDDEAFEHYGNFARKHGFSMRKARSRISPQLGVYKRDFVCYRSGFAPVKRKANGEHHRDRKSVRCGCDAKMYLSKDVVDGVSQWTVLQFSNVHNHELLEDDQVRLLPAYRKIHEADQERILLLSKAGFPVHRIVKMLELEKGIQGGHLSFLERDVRNFVQNRKKVIQENEALLNEKRENDVLELLEVCKATKEADDDFVYDFTMDENEKVENIAWSYGDSVNKNVVSGDVIYFDTSYRSITYGLLLGVWFGIDSCGRTIFFGCVLLQDETPQSFSWALQTFLQFMKGRCPQTILSDLDPGLRDAIKSEFSGTKHVVPMWNILNKVSSWFCLPLGPRYAEFKSTFNALFHIEKTEEFELKWSQMVSVFGLGSDKHIDLLYSVRPYWAPSYVRGFFLARMSTIAYSKSINAFMKEIVTEHTCLRSFFEQQELVLTMQYATSELYNGSYIIRHFKKLDGERHVLWLPEKEQILCSCKEFESSGILCRHALRILVTKNYFQLPEKYYLSRWHRERSLIVEDEHNNQSFIAEKWFQEYQSQAENLFSESSITKERSDYARKELMKELTRILNEVRDMSETDGVETDGICSMNVAVSPNS* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0932 652 SMART 26again6 527 554 IPR006564 GO:0008270
Mtr2g0932 652 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 26 634 - -
Mtr2g0932 652 ProSiteProfiles Zinc finger SWIM-type profile. 517 552 IPR007527 GO:0008270
Mtr2g0932 652 Coils Coil 613 633 - -
Mtr2g0932 652 Pfam SWIM zinc finger 523 548 IPR007527 GO:0008270
Mtr2g0932 652 Coils Coil 213 233 - -
Mtr2g0932 652 Pfam FAR1 DNA-binding domain 66 156 IPR004330 -
Mtr2g0932 652 Pfam MULE transposase domain 288 381 IPR018289 -
Mtr2g0932 652 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 634 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0932 Mtr-Chr2 9681515 9684887 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g0932 MULE 1.2e-14 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0932 - - gmx:100817107 1037.33