Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0928 ATGGAGGTTTATGCCAAGAAAAAACCATCCAAGAAGGCATTAGAGGAACTGGCAAGGAGACAGAAGAATGCTTTATTTGGAGATAATTCAGAATCTGCTGCTGCTGCAGGTCAAGGAGCAGGTGAAGCAAAATGGGCTCTGTATCATTGCAATTACTGTAAGAAAAATATTACCGGAGTAATCCGTATTAAGTGTGCCGTGTGCCCCGATTTTGACTTATGTGTTGAGTGCTTTTCTGTTGGAGCTGAGCTGACACCCCACAAAAGCAATCATGATTACAGGGTCATGAATAAATTGTCTTTTCCTCTCGTCTCCCCGGACTGGAACGCAGATGAAGAAATGTTGATTCTGGAGGGAATTGAAATGTATGGCCTAGAAAATTGGGCAGAAGTTGCTGAGCATGTTGGAACTAAGAACAAAGAGGCATGCATGGAACACTACATGAAGTTTTACTTGAACTCTCCAGTCTTCCCTCTTCCGGACATGTCTCATGCTGTTGGGAGAAGCAGAGAAGAACTTCTTGCAACGGCGAAAGGGTCGGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTGGTGCTAACAAAAAGGCATCCAATAAAGGTCGGGGAAAAGCTAGTTTGCGGGAAGATTATCCAAAGGACGGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGTCGTACTTTGGTTGAAGCCAGTGGTTATAACCCGAAAAGACAAGAATTCGATCCTGAATATGATGATGATGCTGAGAAATTACTCGCTGATATGGAGTTTAATGACAATGACACTGAGGAGGAGATAGAGATCAAACTTCGTGTGATAAGTGTCTATAATAAAAGGCTTGATGAAAGAGAGCGCAGGAAGAAATTCATACTTGAAAGAAATTTGCTACATGAAAATCCATTTGAGAAGGACTTAACACCCGAGGAAAAGGCAATATGCCGGAAATATGACGTGTTCATGCGCTTACATACTAAGGAAAAGCATGATGAATTGCTCAGAACTGTTATCTCTGAACATAGATATCTGAAAAAGATTCTAGAGACTAAGGAAGCAATTGCTGCTGGTTGCCGCACATCAGCTGAAGCCGATATATATCTGGCAAATAAGAGAAGAAGTGAAGTTGAAGGAAGTGCTCGCGGGGTAAGAGAAAATACTCACGCGGTCCCGAACAATCATGGCGTTCCGAATGCATTGATGTCTCCAGACTCTGCTGGTACCAGACCTGCAAGGCCAGCTACTTCAAGTGCTGTCAATGCAACAAAACACTCTGCCGTTGAGAAACGTTTGTGCTGCGAGTTAAGGTTGTCTCCAACCGTGTATCTGAAGATGCAAGAGGACATGTCGGTACAAATGATTGCTGGAAACATCTCTTCAAAGTCTGATGGTCGTCAAATGTTCAAGAATATGGATACCATGAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGTATTGGTTCCCCCTGA 1488 0.4308 MEVYAKKKPSKKALEELARRQKNALFGDNSESAAAAGQGAGEAKWALYHCNYCKKNITGVIRIKCAVCPDFDLCVECFSVGAELTPHKSNHDYRVMNKLSFPLVSPDWNADEEMLILEGIEMYGLENWAEVAEHVGTKNKEACMEHYMKFYLNSPVFPLPDMSHAVGRSREELLATAKGSDSGPSVNTHAAAGANKKASNKGRGKASLREDYPKDGDFGGNKPNSSRNEGRTLVEASGYNPKRQEFDPEYDDDAEKLLADMEFNDNDTEEEIEIKLRVISVYNKRLDERERRKKFILERNLLHENPFEKDLTPEEKAICRKYDVFMRLHTKEKHDELLRTVISEHRYLKKILETKEAIAAGCRTSAEADIYLANKRRSEVEGSARGVRENTHAVPNNHGVPNALMSPDSAGTRPARPATSSAVNATKHSAVEKRLCCELRLSPTVYLKMQEDMSVQMIAGNISSKSDGRQMFKNMDTMKIDRVYDMLIKKGIGSP* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0928 495 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 11 494 - -
Mtr2g0928 495 MobiDBLite consensus disorder prediction 382 425 - -
Mtr2g0928 495 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Mtr2g0928 495 MobiDBLite consensus disorder prediction 174 248 - -
Mtr2g0928 495 Pfam Zinc finger, ZZ type 48 87 IPR000433 GO:0008270
Mtr2g0928 495 SUPERFAMILY Homeodomain-like 429 492 IPR009057 -
Mtr2g0928 495 Gene3D - 44 100 IPR043145 -
Mtr2g0928 495 Gene3D - 101 153 - -
Mtr2g0928 495 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Mtr2g0928 495 MobiDBLite consensus disorder prediction 180 194 - -
Mtr2g0928 495 PIRSF Txn_adaptor_ADA2 35 495 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mtr2g0928 495 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Mtr2g0928 495 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Mtr2g0928 495 SUPERFAMILY RING/U-box 47 111 - -
Mtr2g0928 495 MobiDBLite consensus disorder prediction 203 217 - -
Mtr2g0928 495 Gene3D - 429 493 IPR036388 -
Mtr2g0928 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Mtr2g0928 495 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Mtr2g0928 495 CDD ZZ_ADA2 48 96 IPR041983 -
Mtr2g0928 495 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Mtr2g0928 495 SMART zz_5 44 88 IPR000433 GO:0008270
Mtr2g0928 495 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 11 494 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mtr2g0928 495 CDD SANT 108 150 IPR001005 -
Mtr2g0928 495 SMART sant 104 153 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0928 Mtr-Chr2 9636205 9640658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0928 18 493 EF-hand Containing Proteins AT3G07740 40.858 7.78e-124 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr2g0928 Myb_DNA-binding 2.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0928 K11314 - gmx:100811887 642.884