Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0927 ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGAGTTGCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCCAAGTGCCCAGATTTTGACTTATGTATTGAGTGCTTTTCTGTTGGAGCTGAGGTGACACCCCACAAAAGCAATCATAATTACAGGGTCATGGATAATTTGAATTTCCATTTCATTTGCCCGGGCTGGCATGCAGATGATGAAATTTTGCTTCTAGAGGGAATAGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCACGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCCCCGTTCTTCCCTCTTCCGGTATATCAGGCTTTGAATGAAGCTGCAATCAGTGCTTCTTATCATATTCGTTTATATAAAGGACTTCCCATGGGGGATCTTAGCATAAAGGAAGAATCACCCTTTTCTCCGTCTAGAGTCAAAATGGAAGATTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCCAATATGAATTCAGGGTCGGATTCAGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGGCGGGGGAAAGGTGGTCCTGGGATCGTTAAAATGGAAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCCTTGGTTGAAGTCAGTGGTTATAACCCGAAAAGACAGGAATTCGATCCTGAATATGATAATGATGCTGAGCAATTACTCGCCGAAATGGAGTTTAAGGACACTGACACTGAGGAGGAGCGAGAGATCAAACTTCGTGTGCTGCGCATTTATTCAAAAAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATACTTGAAAGAAATTTGCTATATCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAAAAGACAATATGCCGGAAATATGATATGTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTACTCAGAACTGTTATCTCTGAACATAGGACTCTGAAAAGAATTCAAGAGCTTAAGGAAGCTCGTGCTGCTGGTTGCCGCAGTTCAGTTGAAGCAGATAGATATCTGGCGCATAAGAGAAGAAAGGAATCTGAAGAAAGTGCTTGTAGGGCAAGAGAAAGTGCTCATGTGGTCCCGAACAATCACGGGGTTCCAAATGCATTAATGTCTCCAGACTCTGCTGGTACCAGACCTGCAGGGTCAAGTTCTGTCAATGAAATGGATGCAACTGGATACTATGGAGCAGATTTACTTTCTGAAGCTGAGAAACGTTTGTGCTGCGAGTTAAGGTTGCCTCCAACCGTTTATCTGAAGATGCAAGAGGACCTATCGGTACAAATGATTGCTGGCAACGTCTCTTCAAAATCTGATGCTCATCAAATGTTCAAGAATATGGATACCATCAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGCTCACCCTGA 1644 0.4246 MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGVAGQGAGEAKRALYHCNYCNKDITGKIRIKCAKCPDFDLCIECFSVGAEVTPHKSNHNYRVMDNLNFHFICPGWHADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPVYQALNEAAISASYHIRLYKGLPMGDLSIKEESPFSPSRVKMEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEVSGYNPKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILERNLLYPNPFEKDLTPEEKTICRKYDMFMRFHTKEEHDELLRTVISEHRTLKRIQELKEARAAGCRSSVEADRYLAHKRRKESEESACRARESAHVVPNNHGVPNALMSPDSAGTRPAGSSSVNEMDATGYYGADLLSEAEKRLCCELRLPPTVYLKMQEDLSVQMIAGNVSSKSDAHQMFKNMDTIKIDRVYDMLIKKGIGSP* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0927 547 SUPERFAMILY Homeodomain-like 457 544 IPR009057 -
Mtr2g0927 547 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 546 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mtr2g0927 547 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 546 - -
Mtr2g0927 547 MobiDBLite consensus disorder prediction 1 38 - -
Mtr2g0927 547 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Mtr2g0927 547 PIRSF Txn_adaptor_ADA2 35 547 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mtr2g0927 547 Gene3D - 102 153 - -
Mtr2g0927 547 MobiDBLite consensus disorder prediction 423 468 - -
Mtr2g0927 547 SUPERFAMILY RING/U-box 48 111 - -
Mtr2g0927 547 Pfam Zinc finger, ZZ type 47 88 IPR000433 GO:0008270
Mtr2g0927 547 MobiDBLite consensus disorder prediction 1 27 - -
Mtr2g0927 547 Gene3D - 461 545 IPR036388 -
Mtr2g0927 547 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Mtr2g0927 547 MobiDBLite consensus disorder prediction 190 292 - -
Mtr2g0927 547 Gene3D - 40 96 IPR043145 -
Mtr2g0927 547 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Mtr2g0927 547 Pfam Myb-like DNA-binding domain 108 150 IPR001005 -
Mtr2g0927 547 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Mtr2g0927 547 MobiDBLite consensus disorder prediction 199 242 - -
Mtr2g0927 547 CDD ZZ_ADA2 48 96 IPR041983 -
Mtr2g0927 547 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Mtr2g0927 547 ProSiteProfiles SANT domain profile. 104 155 IPR017884 -
Mtr2g0927 547 CDD SANT 108 150 IPR001005 -
Mtr2g0927 547 SMART sant 104 153 IPR001005 -
Mtr2g0927 547 SMART zz_5 44 89 IPR000433 GO:0008270
Mtr2g0927 547 MobiDBLite consensus disorder prediction 265 279 - -
Mtr2g0927 547 ProSiteProfiles SWIRM domain profile. 460 547 IPR007526 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0927 Mtr-Chr2 9608612 9613528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0927 1 545 EF-hand Containing Proteins AT3G07740 43.373 1.41e-140 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr2g0927 Myb_DNA-binding 8.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0927 K11314 - gmx:100811887 873.233