Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0922 ATGTATACTTCTCGAAAGAAACCGAATTCAGCCGGTATACAATTATACTACCAGCAACAGTCTTTGAGACAGATTGATTCAAACAAGAATCGTTTCAAAACGTTGCAAACCAATTCCAATAATGGTGGTAGAAGGCAAAGAACCAATGTTTCTTTGGAAACAAGCAACTGGGAGAGCAACTGGGAGAAGCAATTCTGTACCTTGGAATCTTCTCAAGTAGCCAATGATGTCATAGCTTTTGATTCTCCTTCATCTGCTAGTGGTGATCCATTCAACATGAGAAGTACTTTTTCACCACAAATTTCTCGCTATTGCTCCTCTGACAACACCACAAATGTATCGCCGTTAGGTGTTTACTCTAGTGCGGATGATGACAGCTTTGAATTTAAAATGAAAGAAATTGAGCTTTCACTGGTAGGTACCGATATAGAAGTATTCGGCAGCTGTCTGTCCAACTCAAATGGTAGCCTTCACCAAGGGACATCTCAAGATAATGAGTTTCATATTGATGAAATGATTTCAGAGCAAGGCTTTAAGGAATCGGAGATTTCATTGTTAGGTCCCAGTTCAGATATCGTCGACAGCTGCCAGTCCAACTTAAACGGTAGCCTCCACCAAGGTACATCTCAATATGATTGGTCTCAATTTGAAGAAATTATTCCAAAGCTAGACTTGAAAGAAGAACTTATTAGATGTGCACAGTTTGTATTTGATGGTGATTTTCAAAAAGCAATTGGATTCATGAATAAGGTGTTGGGAAAGATGGTATCGGTTGCCGGTTCTCCAATTCAAAGGTTAGGTGCTTACATGTTGGAGGGATTAAGAGCAAGGGTGGAATCATCAGGGAGTGCAATTTATAAAGCCTTGAAATGTGAAGAACCAACAAGCATAGAGTTGATGAGTGCTATGCACATTTTGTATCAGATTTGCCCATATTTTCAGTTTGCTTATATATCATCCAATGCTGTCATTTGTGAAGAAATGCAAAATGAATCAAGAATTCACATAATTGACTTCCAAATTGCACAAGGATCACAGTGGATGTTACTTTTGCATGCTCTCAAGCATAAACCCGGCGGACCTCCGTTCATTCGTGTAACAGGTATCGATGACTCGCAATCGTTTCATGCTAGAGGTGGAAAACTTGATATTGTAGGAAAAAAGCTAGAAGATTGTGCAAAAACTTGTAAAGTTCCATTTGAGTTCAATAGTGTTAAAATGTATGGATGTGAGGTTCAACTGGAAGATTTTGAAGTTCAACATGATGAAGTTCTTGTTGTGAATTTTCCTTTTGCTTTGCATCACATACCGGACGAGAGCGTGAGCATGGAGAATCATAGAGACAGGCTTTTGAGACTGGTGAAGATTTTGTCGCCTAAGGTCGTGTTATTTGTGGAGCAGGAGTCAAACACAAACACATCTCCATTTTTACCAAGGTTTGCTGAGACTTTGAATTATTACACTGCAATGTTTGAATCAATTGATGTGGCTCTTCCTAGAGATGATAAGAAGAGAATTAATGCAGAACAACACTGTGTGGCTCGCGATATCGTGAATATCATAGCTTGTGAGGGAGATGAGAGATTCGAAAGACATGAACTGTTCGGAAAGTGGAAGGCAAGATTTTCAATGGCAGGTTTTGTACCGTTACTGTTGAGTCCATCGGTGATTGATTCAGTCAGAACTCTCTTGAAAGATTTCAATAAAGATTATAGGATTGAACAAACAGATGTTGCTATCAATTTAGCGTGGAAGAGTAAAGTTATGTGCACATCTTCTGCTTGGAGATGTTATTGA 1797 0.3907 MYTSRKKPNSAGIQLYYQQQSLRQIDSNKNRFKTLQTNSNNGGRRQRTNVSLETSNWESNWEKQFCTLESSQVANDVIAFDSPSSASGDPFNMRSTFSPQISRYCSSDNTTNVSPLGVYSSADDDSFEFKMKEIELSLVGTDIEVFGSCLSNSNGSLHQGTSQDNEFHIDEMISEQGFKESEISLLGPSSDIVDSCQSNLNGSLHQGTSQYDWSQFEEIIPKLDLKEELIRCAQFVFDGDFQKAIGFMNKVLGKMVSVAGSPIQRLGAYMLEGLRARVESSGSAIYKALKCEEPTSIELMSAMHILYQICPYFQFAYISSNAVICEEMQNESRIHIIDFQIAQGSQWMLLLHALKHKPGGPPFIRVTGIDDSQSFHARGGKLDIVGKKLEDCAKTCKVPFEFNSVKMYGCEVQLEDFEVQHDEVLVVNFPFALHHIPDESVSMENHRDRLLRLVKILSPKVVLFVEQESNTNTSPFLPRFAETLNYYTAMFESIDVALPRDDKKRINAEQHCVARDIVNIIACEGDERFERHELFGKWKARFSMAGFVPLLLSPSVIDSVRTLLKDFNKDYRIEQTDVAINLAWKSKVMCTSSAWRCY* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0922 598 Pfam GRAS domain family 226 596 IPR005202 -
Mtr2g0922 598 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 178 IPR005202 -
Mtr2g0922 598 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 175 595 IPR005202 -
Mtr2g0922 598 PANTHER SCARECROW-LIKE PROTEIN 13 175 595 IPR030005 -
Mtr2g0922 598 PANTHER SCARECROW-LIKE PROTEIN 13 28 178 IPR030005 -
Mtr2g0922 598 ProSiteProfiles GRAS family profile. 216 596 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0922 Mtr-Chr2 9555245 9557492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0922 1 596 GRAS Transcription Factor Family AT4G17230 46.333 3.64e-177 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mtr2g0922 GRAS 2.9e-119 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0922 - - mtr:MTR_2g026250 1207.2