Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0906 ATGGCGGCGGACCGCCTTCCGCCAGAAATAGTCGCCGAAATCTTCTCCCGCGTACCAGTAAAATCACTTCTCAGATTCCGATCAATTTCAAAATCACTTAAATCCCTAATCGATTCTCACAGCTTCACTAACCTTCACCTCAAAAATTCCCTCAACCGATCCTTAATCCTTCGACACAAATTCGATCTCTACCAACTCCAAATCGATGATGATGATGATTTCTCCAAGTCGATTATTCCACTCAACCATCCTTTCAAGACCGTTCCTATCACGCGTACCAGCTTCATGCCTCTTATTGGTTCATGTAACGGCCTCCTCGCCATTTCCAATAGCCAAATCTGCTTCACGCATCCTTACGCCCCTAACGAAATCACAGTCTTGAACCCTAACACTCATAAACATCGGATTATCCCTTTTCTCCCTCTTGCTATCCCTAACATTCTCGAGTCTGAAAACATTGATCGCGCCGGTGTATGCGTTCACGGCTTCGGTTATGATCCATTAACCGGCGATTACAAACTCCTCAGAATCTCTTGGATAGCCGACCTACATTACTCTTTTGATCCACAGGTGAGACTCTTCAGCTCCAAAACTAACTCGTGGAAAATCATTCCTAGTATGCCGTACGCTCTTCAATATGTTCAAGCTATGGGGGTTTTTGTTCAGAATTCTATCCACTGGGTAATGACTCGGACAATTGTTGAGTCACACCCTTGTTTCATTGTCGCTTTTAACCTAACACTTGAGACTTTCAATGTGGTTCCTTTTCCTGCTGAAATAGAAGGTGAAGAGGTTACAATTGCTGTTGCTGTTTTAGGAGAGTGTCTTTGTATGACTGTGAATTATGAAACTACTAAAATTGATGTTTGGGTGATGAAACAATATGGTTCTAGAGATAGTTGGTGTAAACTTTTTACTTTGGTTAAATCGCGGTTCACTTTGAAATCTTTGAGGCCTTTATGTTATTCTAGGGATGGAAGTAAGGTTCTGTTGGACGGAACTCAGGTTTTGTTGGAGGTAAATCATAGGAAGCTGTTTTGGTATGATTTGAAGAGTGAACAAATTAGTTATGTTGAAGGAATTCCTAATTTGGATGAAGCTATGATTTGTGTTGAAAGTCTTCTACCACCTTCCTTCCCTGTTGATAATTGTAGGAAGAAGGAGAATCATACGAACAAGAGAAAGAAACGGGAGGACTTCTTGTCCCGAGGATTTAAATTGAGATTGTAA 1230 0.4138 MAADRLPPEIVAEIFSRVPVKSLLRFRSISKSLKSLIDSHSFTNLHLKNSLNRSLILRHKFDLYQLQIDDDDDFSKSIIPLNHPFKTVPITRTSFMPLIGSCNGLLAISNSQICFTHPYAPNEITVLNPNTHKHRIIPFLPLAIPNILESENIDRAGVCVHGFGYDPLTGDYKLLRISWIADLHYSFDPQVRLFSSKTNSWKIIPSMPYALQYVQAMGVFVQNSIHWVMTRTIVESHPCFIVAFNLTLETFNVVPFPAEIEGEEVTIAVAVLGECLCMTVNYETTKIDVWVMKQYGSRDSWCKLFTLVKSRFTLKSLRPLCYSRDGSKVLLDGTQVLLEVNHRKLFWYDLKSEQISYVEGIPNLDEAMICVESLLPPSFPVDNCRKKENHTNKRKKREDFLSRGFKLRL* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0906 409 ProSiteProfiles F-box domain profile. 1 45 IPR001810 GO:0005515
Mtr2g0906 409 SUPERFAMILY Galactose oxidase, central domain 94 219 IPR011043 -
Mtr2g0906 409 SUPERFAMILY F-box domain 4 52 IPR036047 GO:0005515
Mtr2g0906 409 TIGRFAM F_box_assoc_1: F-box protein interaction domain 100 316 IPR017451 -
Mtr2g0906 409 Pfam F-box associated 218 311 IPR006527 -
Mtr2g0906 409 PANTHER OS02G0783600 PROTEIN 5 375 - -
Mtr2g0906 409 PANTHER F-BOX PROTEIN CPR1 5 375 - -
Mtr2g0906 409 SMART fbox_2 6 46 IPR001810 GO:0005515
Mtr2g0906 409 Pfam F-box domain 4 42 IPR001810 GO:0005515
Mtr2g0906 409 Gene3D - 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0906 Mtr-Chr2 9324180 9326450 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0906 133 307 Carbohydrate Esterase AT1G25141 21.547 7.89e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0906 - - mtr:MTR_2g025420 523.087