Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0865 ATGGAGCATCTTCTTAGATCACTTCGATCATCGCGTTTTCGTTTCCGTTCACTTCCTTCTTCTCACTCCTCTCGCCGCCTTCATTCTTCTATCTCTCCTAGAGTAGAAGCTGCTTCTGCTCGATCATCATCTTCATCGGTTTCCGATGTTTCGAGAGTTTTGCGAGGGGATTTGGGACAGTATTCGATGCTACCTGCTGTTTTGGCTGGTTTATTTGGAATTGAATTAGTGGAAACTGCTTATGCGGAAGAACAAGCTAATAGTAACGAGGATGTGCAAGAAATTGCTATTAAAGAGCGTCAGAGAATTCAAGACTTGCTTACAACTAAAGGAATTCGTCCAAGTTCTGTTCCTCGTTTCAATGTCGCTGTTAAAGGTCAAAAGGTGAGTATAAAGTTTCAAATTCCTCCTGGCTGTGAAGTTTCACAAGTTATTGCAAATCTTACTGCACATCTTGGACTGAAATCTGAAGGCCATGGCGGTGGTTCAGATATGATTTTGCGTGCATGGGACAGCACGGTTGCTTGGCAACTAACCCTGACTCATCCATCAAAGCAAAAACATATTCAACAGAATGATCCGTCATTAACTGATACAATTGCACATGATACAGATCTATGCATACTTATATTTCATTCTCTCATTGGCACAGATAAAGTTGAAATTGAATTTATGAAGCAAGGGAACTTGAGCCCTGAAGAGCTCGATGCTTTCATATCTGTTTTACAATTAGCTGGTAACAAGTTGGTAGAAAGAAATCCTCTGGAAAGAAAGCGAAGGGAAGAGACTGAACAGCCGCAATCTGTAGATAAATCTATTTCTAGTCTTGAGGCCATGGGAGTAAAAGTATATGGGCTCAATGAACCCATAGGTATATCAAACAGTGAGATATCATGGGACATCATCGCTGGGTACGAGGATCAAAAACGGGTGATAGAAGATACAGTACTATTGGCTTTGCGCAGTCCTGAAGTATATGATGATATTGCTCGAGGGACTCGGCATAAGTTTGAGTCTAACAGACCTCGAGCCGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACCTCTTGTGCCCGTGTTATTGCCAATCAAGCGGGCGTCCCTTTGCTTTATGTGCCACTTGAGGTAGTGATGTCTGAATTCTACGGTAAAAGTGAACGCCTCCTAGGGAAAGTGTTTTCACTAGCAAACAATCTTCCCAATGGTGCTATTATATTTTTGGACGAGATTGATTCTCTTGCTGCTTCTCGTGATAATGATATGCATGAAGCTACACGTAGAATGTTGTCAGTATTATTGCGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTTGTCATTGCTGCCACAAATAGAAAGGAGGACCTTGATCCTGCATTAATTAGTCGGTTTGATACTATGATCGCTTTTGGTTTACCTGATCAACAAACTCGTCAGGAAATAGCATCTAAATATGCAAAGCACCTGTCTAAAGCCGAACTTGATGAACTTGCAAGAGTTGCAGAAGATATGGCTGGAAGAGATATTAGAGATGTTTGTCTGCAAGCGGAACGATCCTGGGCATCAAAGATTATCCGGGGACAAGTGTCTAAAGACGGCGAACAAGCGAACCTTCCACCTTTGCAAGAATATATAGCATGTGCTACAAATCGACGGGAAGCGCTGCTTAGTGCTGCTGCAAATAGGAAGATTCGAAGTTCTTCCCACCAAAGGATGATAAATGAATAG 1734 0.4227 MEHLLRSLRSSRFRFRSLPSSHSSRRLHSSISPRVEAASARSSSSSVSDVSRVLRGDLGQYSMLPAVLAGLFGIELVETAYAEEQANSNEDVQEIAIKERQRIQDLLTTKGIRPSSVPRFNVAVKGQKVSIKFQIPPGCEVSQVIANLTAHLGLKSEGHGGGSDMILRAWDSTVAWQLTLTHPSKQKHIQQNDPSLTDTIAHDTDLCILIFHSLIGTDKVEIEFMKQGNLSPEELDAFISVLQLAGNKLVERNPLERKRREETEQPQSVDKSISSLEAMGVKVYGLNEPIGISNSEISWDIIAGYEDQKRVIEDTVLLALRSPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVMSEFYGKSERLLGKVFSLANNLPNGAIIFLDEIDSLAASRDNDMHEATRRMLSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIAFGLPDQQTRQEIASKYAKHLSKAELDELARVAEDMAGRDIRDVCLQAERSWASKIIRGQVSKDGEQANLPPLQEYIACATNRREALLSAAANRKIRSSSHQRMINE* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0865 577 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 71 560 - -
Mtr2g0865 577 SMART AAA_5 341 476 IPR003593 -
Mtr2g0865 577 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 71 560 - -
Mtr2g0865 577 CDD AAA 338 474 - -
Mtr2g0865 577 ProSitePatterns AAA-protein family signature. 446 465 IPR003960 GO:0005524|GO:0016887
Mtr2g0865 577 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 520 IPR027417 -
Mtr2g0865 577 Pfam ATPase family associated with various cellular activities (AAA) 345 473 IPR003959 GO:0005524|GO:0016887
Mtr2g0865 577 Gene3D - 286 497 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0865 Mtr-Chr2 8859518 8866873 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0865 341 541 Calmodulin-binding Proteins AT3G56690 35.577 3.48e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0865 - - mtr:MTR_2g024440 1052.74