Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0861 ATGGATAATGATGATAGGGATCTCTTTTCTATTGTTCGTAGCTGCAACGCTACTACATTTACTACTCCTACCACCATTTTTGAAAATTCACCGCCACCTCAAATCGAAACCACTACCAATAACATCACATTCACTCAAAGTGCCACACCATTTTGCTCTGATGATTTTACTTTTAACCCAGAAAAAAGTCCAGTCTCTTTTTCCCCACTTAAACCAAATGACTTCATTGATCTAGATAAATTGATGATCAATTTCAATCCCATCCCCACCCCAGCTATCACTAGTATGCCAAAAATCAATACCACCACCAACACTGTCCCATCCCCCTTGACAACCACCATCCCCACCCACATCACCAACATTAACACTAGTGTTCATGTTATCCACACTCCCACCACTCCCCCTACCATTACCCCCATTATCACTGCCACCACAACCACTATAATCACCCCGACCACCATTACCCCTATCAGATCTGATGCAAGCACTACCATGACAAAAACTAGTGCTCATGAAACCAATCAATATCCCACCAATTATAATTTCCCAATACTCGCTGGGCAACAACAGATTCAAAAAAACATCAACAATCAAGTGTCTCTTCCCAAACCTGTTGCATGCATTGATATCACAACCGCTCATTTTGACCGTGCATACAACCATCCATCAGTTGTACTATTTGGATCGAGAAAAAGAAAACATAATAACCAAATGGCACTGGTATGCTATATGAGGGAGGATGAGCTTCCAAAAGACCCGTGGGCGTGGAGGAAATATGGGCAAAAACCCATTAAAGGGTCACCACATCCAAGGAGCTATTACAAATGTAGCACTTGGTCAGATTGTCCAGCAAGAAGAAAGGTTGAAAAATGCAAAACTCAAGAGAGCACTTATATTGTGACATATGAAGGAGAGCACAATCATGCAAAGCCAACATTTAATAAGAACGTTGTTGTTGGTACCTCCCAGTGCAAGTCACCAAAGACTGGATTACACTCTGCGGAAGAAATTGGATCATCTACAAACATCACAAAGTCAGGTTCGCCTAATGTGGTGATGTTGCAGATTGATCATCCGGAGAGCAGCAATGCTCAGGTTCTCGCTGATCAATCAAAAATCCTTTATCCCGAAATGGAACTATTAGAGAGTCAATTACCTGTTGTTGAAGAAGTTGGATCATCCTCAAATGTTAGAAACTTGGGTTCACACAACAAAATGATTATTGAATTTGATGAGCCACAAAGTAGCAATGTTACGGGTGTTGTTGGTGACTCAAACCTCCCTTATTCTGAAACTGGATTCATTGGAAGCTTTGATGATGATGATGACATTTTGATACCAAACATAACAGCTTGGTCAGAAGATTATTTAATGGACTTCAACCGCCTCAATGGTGTTGCTATATTCCCTTAG 1413 0.4105 MDNDDRDLFSIVRSCNATTFTTPTTIFENSPPPQIETTTNNITFTQSATPFCSDDFTFNPEKSPVSFSPLKPNDFIDLDKLMINFNPIPTPAITSMPKINTTTNTVPSPLTTTIPTHITNINTSVHVIHTPTTPPTITPIITATTTTIITPTTITPIRSDASTTMTKTSAHETNQYPTNYNFPILAGQQQIQKNINNQVSLPKPVACIDITTAHFDRAYNHPSVVLFGSRKRKHNNQMALVCYMREDELPKDPWAWRKYGQKPIKGSPHPRSYYKCSTWSDCPARRKVEKCKTQESTYIVTYEGEHNHAKPTFNKNVVVGTSQCKSPKTGLHSAEEIGSSTNITKSGSPNVVMLQIDHPESSNAQVLADQSKILYPEMELLESQLPVVEEVGSSSNVRNLGSHNKMIIEFDEPQSSNVTGVVGDSNLPYSETGFIGSFDDDDDILIPNITAWSEDYLMDFNRLNGVAIFP* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0861 470 Pfam WRKY DNA -binding domain 252 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0861 470 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0861 470 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 465 IPR044810 GO:0003700
Mtr2g0861 470 Gene3D WRKY domain 235 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g0861 470 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 5 465 - -
Mtr2g0861 470 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0861 470 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0861 Mtr-Chr2 8819229 8821114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0861 229 325 WRKY Transcription Factor Family AT4G01250 48.454 6.94e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g0861 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0861 - K13425 mtr:MTR_2g024380 890.567