Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0860 ATGTCATTGGTGTGCTATATGAGGGAGGATGAGCTTCCAAAAGACCCGTGGGCTTGGAGAAAATATGGGCAAAAACCCATTAAAGGGTCTCCACATCCAAGGAGCTATTACAAATGTAGCACTTGGTCAGATTGTCCAGCAAGAAGAAAGGTTGAAAAATGCAAAACTCAAGAGAACACCTATATTGTGACATATGAAGGAGAGCACAATCATGCAAAGCCAACATCTAATAAGAATGTTGTTGTTGGTACCTCCCAACGCAAGTCACCAGAGACTGGATTACACTCTATGGAAGAAGTTGGATCATCTACAAACATCACAAATTCAGGTTCGCCTAATGTGGTGATGTTGCATATTGATCATCCGGAGAGCAGCAATGCCCAGGTTCTCGCTGATCAATCAAAAACCCCTTATCCGGAAGTGGAACTATTAGAGAGTCAATCACTCGTTGTTGAAGATGTTGGATCATCCTCAAATGTTAGAAACTTGGGTTCACATAACAAAATGATTCTGCAATTTGAGGAGCCACAAAGCAGCAATGTTACAGGTGTTGTCGGTGACTCAAACCTCCCTTATTCTGAAACTGGATTCATTGGAAGCTTTGATGATAATGATGACATTTTGATACCAAACATAACAACTTGGTCAGAAGATTACTTAATGGACTTCAACCGCCTCAATGGTGTTGCTATATTCCCTTAG 702 0.4117 MSLVCYMREDELPKDPWAWRKYGQKPIKGSPHPRSYYKCSTWSDCPARRKVEKCKTQENTYIVTYEGEHNHAKPTSNKNVVVGTSQRKSPETGLHSMEEVGSSTNITNSGSPNVVMLHIDHPESSNAQVLADQSKTPYPEVELLESQSLVVEDVGSSSNVRNLGSHNKMILQFEEPQSSNVTGVVGDSNLPYSETGFIGSFDDNDDILIPNITTWSEDYLMDFNRLNGVAIFP* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0860 233 Pfam WRKY DNA -binding domain 15 71 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0860 233 MobiDBLite consensus disorder prediction 88 109 - -
Mtr2g0860 233 SMART WRKY_cls 13 73 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0860 233 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 12 228 - -
Mtr2g0860 233 SUPERFAMILY WRKY DNA-binding domain 6 74 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g0860 233 ProSiteProfiles WRKY domain profile. 8 74 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0860 233 Gene3D WRKY domain 2 75 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g0860 233 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 228 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0860 Mtr-Chr2 8809311 8810290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0860 4 88 WRKY Transcription Factor Family AT4G01250 51.765 3.57e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g0860 WRKY 5.4e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0860 - K13425 mtr:MTR_2g024380 446.432