Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0856 ATGATCACAAATCAAATTTTCATATTAAATTTCCTTCTCTTTGTATTGTTGATTATGAAAACCGTGAGAAGTTGTAATTCTGGCTGTGACCTTGCTCTAGCTTCATATTACATAGAAGAAGGAACAAATCTAACTTACATTAGCAACCTTTTCAACCAACCAACCTCAGAAATTCTAAAATACAACCCAAACATTCAAAACCCCGATACTATTCAAAGCCATACAAGACTCAACATACCATTCACGTGTGACTGTCTCAGTGGTTTGTTCTTAGGACACACTTTCTCGTACAAACTAAAAGAAGGTGAAAATTACAAAGCAGTTGCTAACGGTTATTATTCAAACCTAACTACTATAGATTTTCTTATCAGAGTCAATAGTTATCCAGCTACTGATATACCTGCTGGTACTGTAATCAATGTTACTGTAAATTGTTCTTGTGGTGATAGAGATGTTTCAAAGGATTATGGGTTGTTTTTGACGTATCCCTTACGCAACGGTGATAGTTTGCCGGGAATTGCGATGGAGAGTGGTGTTCCGGTGGAGCTGGTGAAGAGGTATAACCCTGCATCGAATTTTAGGGCAGGTGAACTCGTGTTTTTGCCGGCCAAAGATGAAAATGGAAACTTTCCACCACTAAAGATGGGATCAGGAATGTCCAAAGGAGGCATTGTTGGCATAGTTGTTGGAGGAGCTTTTGGGATTTTACTTCTAGTACTCATTCTATATGTTGTGTTCTATAGAAGGAAAAAAGTGGCTGATCAGGTTACTCTTCTACCAGTACCAGGAGCATCTGAACTAGATCAGTCTAGTCAACTCCAGCATGGTCGTGGAAGCAGCATGGATAAGACATCAGAGTCTACTACTGTTGTTTCTCCAAGGTTGACAGGTATTACAGTAGACAAGTCAGTGGAGTTCTCATATGAGGAGTTAGCCAAAGCTACTGACGGATTTAGCACGGCTAATATAATCGGTCGAGGTGGCTTTGGATTGGTATACTATGCCGAGCTACGAAATGAGAAAGCTGCAATAAAAAAGATGGATATGCAAGCATCAAAAGAATTCCTAGCTGAACTAAAGGTTCTGACACACGTCCATCACTTGAACTTGGTGCGGCTAATTGGATATTGTGTTGAGGGCTCTTTATTTTTGGTTTATGAGTACATTGAGAATGGCAATTTAAGTCAACATCTGCGTGGCACAGGTAAGGATCCGTTATCATGGCCAGCTAGAGTTCAGATTGCATTAGACTCAGCAAGAGGATTGGAATACATTCATGAACATACAGTTCCTGTCTACATTCATCGAGATGTTAAATCGGCAAACATTTTGATAGACAAAAACTTCCGCGGAAAGGTTGCAGATTTCGGCCTGACAAAATTGACCGAATATGGTAGTTCTTCGTTACAAACGCGCCTTGTCGGGACGTTCGGCTATATGCCCCCTGAATACGCACAGTATGGTGAAGTTTCTCCCAAAATAGATGTATATGCATTTGGAGTTGTTCTGTTTGAGCTTATATCTGGGAAGCAAGCTATTGTGAAAACAGATGAGGCTAAGAATGAATCAAAAGGACTAGTTGCACTGTTTGAAGAAGTTCTTGGTCTTTCAGAACCAAAAGAAGATCTTGGTAAACTTGTTGACCCTAGGCTTGGTGAAAATTACCCTATTGACTCAGTATTTAAGATGTCTCAGCTTGCTAAAGCATGTACACATGAAAATCCTCAACTTAGACCAAGCATGAGATCAATTGTAGTTGCCTTAATGACATTATCATCAGCAGCTGAGGATTGGGATGTTGGCTCCTTCTATGAAAACCAAGCATTAGTCCATTTAATGTCTGGAAGGTAG 1851 0.4003 MITNQIFILNFLLFVLLIMKTVRSCNSGCDLALASYYIEEGTNLTYISNLFNQPTSEILKYNPNIQNPDTIQSHTRLNIPFTCDCLSGLFLGHTFSYKLKEGENYKAVANGYYSNLTTIDFLIRVNSYPATDIPAGTVINVTVNCSCGDRDVSKDYGLFLTYPLRNGDSLPGIAMESGVPVELVKRYNPASNFRAGELVFLPAKDENGNFPPLKMGSGMSKGGIVGIVVGGAFGILLLVLILYVVFYRRKKVADQVTLLPVPGASELDQSSQLQHGRGSSMDKTSESTTVVSPRLTGITVDKSVEFSYEELAKATDGFSTANIIGRGGFGLVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGTGKDPLSWPARVQIALDSARGLEYIHEHTVPVYIHRDVKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLFELISGKQAIVKTDEAKNESKGLVALFEEVLGLSEPKEDLGKLVDPRLGENYPIDSVFKMSQLAKACTHENPQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0856 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 4 616 IPR044812 GO:0019199|GO:0045087
Mtr2g0856 616 SUPERFAMILY Protein kinase-like (PK-like) 295 588 IPR011009 -
Mtr2g0856 616 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0856 616 Gene3D LysM domain 24 85 IPR036779 -
Mtr2g0856 616 CDD STKc_IRAK 324 585 - -
Mtr2g0856 616 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Mtr2g0856 616 Pfam LysM domain 36 80 IPR018392 -
Mtr2g0856 616 Gene3D Phosphorylase Kinase; domain 1 299 388 - -
Mtr2g0856 616 Pfam Protein tyrosine and serine/threonine kinase 321 587 IPR001245 GO:0004672|GO:0006468
Mtr2g0856 616 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 4 616 - -
Mtr2g0856 616 Gene3D Transferase(Phosphotransferase) domain 1 389 600 - -
Mtr2g0856 616 SMART serkin_6 318 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0856 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Mtr2g0856 616 ProSiteProfiles LysM domain profile. 34 79 IPR018392 -
Mtr2g0856 616 SMART LysM_2 35 80 IPR018392 -
Mtr2g0856 616 SMART LysM_2 161 202 IPR018392 -
Mtr2g0856 616 SMART LysM_2 96 142 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0856 Mtr-Chr2 8764941 8773423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0856 7 616 Receptor kinase-like Gene Family AT3G21630 56.200 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mtr2g0856 PK_Tyr_Ser-Thr 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0856 - K13429 gmx:100802308 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0856 2 8764941 8773423 Mtr2g0856 2 8764941 8773423 ECH