Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0855 ATGAGTATTGTATATGATTCGGGGAGAATGAAGATTAAAATTTATAAACAAGGAAACTCAAATCAACAATCTGAGTTTTTAAGGAACTCAAAATCAAGTGATGAAAGACACATTGTACCTTGTGTGAAGAAGAAGAGTAGTACTGCACCGGTTGAAAGAAAAGTTTCAGCCTCGGCAGCAGAATCGTCACAACAAAATATTGATACAAATCAAAACAAAACATCAACATGCTCAAGAGATTCTGCAAATTCAAAGAGAAGAGTTGAAAAATGTTGCAAACTTGATATTACCAAATCAAAGAAGTATGGTAGTACATCAAAACACAAGAAAATAAAACTTGAAGGCAACAGCAATTTTGAAGATGAAGAAGGTGACGAAGTTATATTTGTTTCAATGACAAAGTCAAGAAGCAAAGGAAAGTTGGATAATATAATGGAAACTGAACAAAATATCAAAACATGTCATCAGTGCTTGAGAAAGGATAGGCCACAATTTGTACCTTGTACAAAATGTCAGAAAATATACTGTTTAAGATGTATTAAACAATGGTACCCCAATATGTCAATTGGAGATATCAGAGAGAGGTGCCCCTTTTGCCGTAAGAATTGCAATTGCAATGTTTGCTTGGGTTCAAGAGGAATGATCAAGACGTCTAAGAGGAACATTACAGATTGTGAAAAAGTTCATCATCACCGATATATTATTAATTTACTACTTCCATCACTTAAACAAATTTTTGAAGAACAATGCCAGGAACAAGAGATTGAAGCTAAGATACAAGGGAAATCATGTTCAGAAATTAAGATACCACAAATTCCATGTCATGGGAAGGAGCGTATCTTTTGTGATCATTGTGCTACTTCAATTGTTGACCTTTATAGAAGCTGTCCTAAATGTTCCTTTGAAATATGCCTTAGTTGTTGCAAAGAAATACGCAACGGAAGTATTACACCACGCTTTGAAATGAAGTTTCAATACAAAAATAGAGGTGATGAATACATGCATGGTGGTGATCCTCTACTGATAACTTGTGATACAAGTAATTTAGAAGGTAATGTTGAGATATTTACCAATTGGAATGTTAATAGTGATGGAAGTGTTGAATGTGGTTGTGGTGGCTGTGTGATGGAGCTGAAACGCATTCTTCCAGATGGGAGGATATCTAAATTGGTAACAAAAGCCCGTCTTATGAAGAAACATTTTTGCAAAATTGAAAAACAAAAGAATGTTGAGAAAGAAAGAATCTCAAGTTGCAAGAATTGCCATGACATAAACTGTCCAATGTCAAGTGACCTTATAGAAAAAAAGCTATTTAAATTCCAAAAGTATTGGAGGAATGGTGAACCCGTTCTAATATCTGACGTTCTCAAAAAAGGGACAGGATTGAGTTGGGAGCCAATGGTTACTTGGAGAGCATTGCGTGTAAATTCATCTTCAAGTGTCAACTCAAATATAAAGGCTATTGATTGCTTGGCTAGTTGTGAGGTAACAATTGACACTCGCCAGTTCTTTGAAGGTTATCAAGAGGGAAGAAGATATATAAATTTCTGGCCGGAGATGCTCAAGCTAAAAGATTGGCCCCCTTATGATGAGTTTGAAAATGTCTTGCCACGCCATTGTGATGAGTTTATCCGTTGTTTGCCATTTCAAGAGTATTGCGATCCTCAATCTGGAATTCTAAACCTTGCTGCAAAGTTGCCATCACATGTCTTAAAGCCTGACTTAGGTCCAAAAACTTACATTGCTTATGGAACCAGAGAAGAGCTTGGCAGAGGAGATTCTGTTACAAAACTTCATTGTGATATGGCAGATGCGGTCAATATTTTGACTCATATAAGTGAGGTGAAATTAACAGATGAACAACTTTATGCTATTAAAAAAATAAAAAGCGCACATAAGACTCAAGATAAGAAAGAAGGTCTTGTTCAAGATAATGGAGGTCATTTTGAGATCAATGGAAAGCTATTTCCAAATGAAGTTCCATCAATCACAGAAGATACATCAGAAACAGCTGGTGCACTTTGGGACATATTCCGAAGAGAAGATACTGCAAAGTTAGAAACATATCTTAGAAGACATTCCAAAGAATTTAGGCATACTTATTGTTCTCCAGTAAAAGAGGTTATTCATCCTATTCATGACCAATGTTTTTATTTGACTTTTGAGCATAAGAAGAAGCTGGAGGAAGAGTTTGGTGTAGTACCTTTGACTTTTGAGCAGAAACTTGGTGAAGCAGTATTTATACCTGCTGGATGCCCTCACCAAGTCAGAAATCTGAAGTCATGCACGAAAGTTGCAGTAGACTTTGTGTCACCAGAAAATGTGGATATATGCATGCTTTTAACTGAAGAGTTTCGTCGCCTTCCTAAGAATCACATGGCAAGAGAAGACAAACTTGAGGTAAAAAAGATGATAATCCATGCTGTTGACCAAGTTGTTCAAGACTTGGAAGCTTTCATTAGATGCTCATCACTAGGCTGA 2481 0.362 MSIVYDSGRMKIKIYKQGNSNQQSEFLRNSKSSDERHIVPCVKKKSSTAPVERKVSASAAESSQQNIDTNQNKTSTCSRDSANSKRRVEKCCKLDITKSKKYGSTSKHKKIKLEGNSNFEDEEGDEVIFVSMTKSRSKGKLDNIMETEQNIKTCHQCLRKDRPQFVPCTKCQKIYCLRCIKQWYPNMSIGDIRERCPFCRKNCNCNVCLGSRGMIKTSKRNITDCEKVHHHRYIINLLLPSLKQIFEEQCQEQEIEAKIQGKSCSEIKIPQIPCHGKERIFCDHCATSIVDLYRSCPKCSFEICLSCCKEIRNGSITPRFEMKFQYKNRGDEYMHGGDPLLITCDTSNLEGNVEIFTNWNVNSDGSVECGCGGCVMELKRILPDGRISKLVTKARLMKKHFCKIEKQKNVEKERISSCKNCHDINCPMSSDLIEKKLFKFQKYWRNGEPVLISDVLKKGTGLSWEPMVTWRALRVNSSSSVNSNIKAIDCLASCEVTIDTRQFFEGYQEGRRYINFWPEMLKLKDWPPYDEFENVLPRHCDEFIRCLPFQEYCDPQSGILNLAAKLPSHVLKPDLGPKTYIAYGTREELGRGDSVTKLHCDMADAVNILTHISEVKLTDEQLYAIKKIKSAHKTQDKKEGLVQDNGGHFEINGKLFPNEVPSITEDTSETAGALWDIFRREDTAKLETYLRRHSKEFRHTYCSPVKEVIHPIHDQCFYLTFEHKKKLEEEFGVVPLTFEQKLGEAVFIPAGCPHQVRNLKSCTKVAVDFVSPENVDICMLLTEEFRRLPKNHMAREDKLEVKKMIIHAVDQVVQDLEAFIRCSSLG* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0855 826 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 3 823 - -
Mtr2g0855 826 SMART cupin_9 536 786 IPR003347 -
Mtr2g0855 826 Pfam JmjC domain, hydroxylase 666 769 IPR003347 -
Mtr2g0855 826 MobiDBLite consensus disorder prediction 19 81 - -
Mtr2g0855 826 Gene3D Cupin 418 795 - -
Mtr2g0855 826 ProSiteProfiles Zinc finger RING-type profile. 154 200 IPR001841 -
Mtr2g0855 826 ProSiteProfiles JmjC domain profile. 555 786 IPR003347 -
Mtr2g0855 826 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 3 823 IPR045109 GO:0032454|GO:0033169
Mtr2g0855 826 MobiDBLite consensus disorder prediction 29 50 - -
Mtr2g0855 826 SUPERFAMILY Clavaminate synthase-like 438 819 - -
Mtr2g0855 826 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0855 Mtr-Chr2 8751724 8756352 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr2g0855 JmjC 1.5e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0855 K15601 - gmx:100801772 971.459