Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0851 ATGTGCTCCAAAAGAACTAGGTGGTTGTGTTGTTGTGTGATGGAGCTGAAAGGCATTCTTCCAGATGAGACGATATCTAAATTGGTAACAAAAGCTCGTCGTGTTAAGAAACATTTTCGCAAAATTGAAAAACAAAAGAATGTTGAGAAGGAAAGAATCTCAAGTTGCATGAATTGCCATGACATAAAGTGTCCAATGTCAAGTGACCTTATAGATAAAAATCTATTTAAATTCCAAAAAAAATTGAGGAATGGTGAACCCTTTATAGTACCTGACGTTCTCAAACAAGGGACAGGATTGAGTTGGGAGCCAATGGTTACACTGAGAGCATTGTGTGCAAATTCATCTTCAAGTGTCAACTCAGATGTTAAATCAAATGTAAAGGCTTTTGATTGCTTGGCTAGTTGTGAGGTAGAAATTAACACTCGTCAGTTCTTCAAAGGTTATAAAGAGGGGAGAAGATATGTAAATTTATGGCCAGAGATGCTCAAGCTAAAAGACTGGCCACCTTCTGATGAGTTTGAAAATCTCTTGCCGCGCCATTGTGACGAGTTTATCCATTGTCTGCCATTTCAAGAGTATAGCGATCCTCGATCAGGAATTCTCAACCTTGCTACAAAGTTGCCACCACATGTCATAAAGCCTGACTTAGGTCCAAAAACTTACATTGCTTATGGAACCAGAGAAGAGCTTGGCAGAGGAGATTCTGTTACAAAACTTCATTGTGATATTGCAGACGCAGTAAACATTCTGACTCATATAACTGAGGTGAAATTAACTGAAGATCAACTTTGTGCTATTAAAAAAATAAAAAGCGCACACAAGGCTCAAGATATTAAAGAGGGTCGTGCTCAAGATAATAGAGGCCCTTTTGTGCCATCTATCACAAAAGAAATATCTGAAACAGCTGGTGCTCTTTGGGACATATTTAAAAGAGAAGATACTGCAAAGTTAGAAGCATATCTTCAAAAACATTGCAAAGAATTTAGGCATACTTTTTTCTCTCCGGTAGAAAAGGTTATTCATCCTATTCATGACCAATGTTTTTATTTGACTTTTGACCATAAGAAGAAGCTGGAGAAAGAATTTGGTGTAGTACCTTTGACTTTTGAGCAGAAACTTGGTGAAGCAGTATTTATACTTGCTGGATGCCCTCACCAAGTCAGAAATCTGAAGTCATGCACGAAAATTGCAGCAGACTTTGTGTCACCAGAAAATGTGGATATCTGCATGCTTTTAACTGAAGAGTTTCGTCGCCTTCCTAAGAATCACAGGGCAAGAGAAGACAAACTTGAGTTAAAAAATATGATAATCTATGCTGCTGACCAAGTTGTTGAAGAATTGGAAGCTTTCATTGGATGA 1362 0.3789 MCSKRTRWLCCCVMELKGILPDETISKLVTKARRVKKHFRKIEKQKNVEKERISSCMNCHDIKCPMSSDLIDKNLFKFQKKLRNGEPFIVPDVLKQGTGLSWEPMVTLRALCANSSSSVNSDVKSNVKAFDCLASCEVEINTRQFFKGYKEGRRYVNLWPEMLKLKDWPPSDEFENLLPRHCDEFIHCLPFQEYSDPRSGILNLATKLPPHVIKPDLGPKTYIAYGTREELGRGDSVTKLHCDIADAVNILTHITEVKLTEDQLCAIKKIKSAHKAQDIKEGRAQDNRGPFVPSITKEISETAGALWDIFKREDTAKLEAYLQKHCKEFRHTFFSPVEKVIHPIHDQCFYLTFDHKKKLEKEFGVVPLTFEQKLGEAVFILAGCPHQVRNLKSCTKIAADFVSPENVDICMLLTEEFRRLPKNHRAREDKLELKNMIIYAADQVVEELEAFIG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0851 453 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 5 452 IPR045109 GO:0032454|GO:0033169
Mtr2g0851 453 SMART cupin_9 178 418 IPR003347 -
Mtr2g0851 453 SUPERFAMILY Clavaminate synthase-like 79 449 - -
Mtr2g0851 453 Gene3D Cupin 53 427 - -
Mtr2g0851 453 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 5 452 - -
Mtr2g0851 453 ProSiteProfiles JmjC domain profile. 197 418 IPR003347 -
Mtr2g0851 453 Pfam JmjC domain, hydroxylase 305 401 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0851 Mtr-Chr2 8632831 8635844 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mtr2g0851 JmjC 4.4e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0851 K15601 - gmx:100801772 589.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0851 2 8632831 8635844 Mtr2g0851 2 8632831 8635844 ECH