Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0842 ATGGACAAAGCATGGGGTCTAGCTCTTGATACTTCTTCATCTTCTCCAATTCCAATATCTCACTCTCACCCTTTTTTACCTTCTAAACAACCATCTTCTACTCATACCAACGATAGAATGTTTCCTATTCTAGGATTTCCTGTCAACCTTACCCGTAACACCAACGGCGAAGACGGGGGTGACCGGAAAATAACCGGTGAAGTTGATTTCTTCTCTGAAAGAAACAAACCATCACCTTCACATGAACACAACCAACATGTTAAATCCAACATCATCAAAAAGGAGATTGTTTCAACCGATGAAAAGCCTTCCACTTCTAATATCCATGTTAATACTGGTTTACAACTTGCAAACACCGGAAGTGATCAATCTGTAGTGGATGATGGAGCTTCATCTGATGCTGAAAATAAACGCGCCAAGACTACTGAGCTTGCACAATTGCAAGTGGAGCTTCAACGGATGAATTCAGAGAACAAAAAGCTGAAAGAGATGCTAAGTCATGTTACCGGTAATTACACGGCTTTGCAGTTGCAACTTGTGGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTTGTTAATGCAAAAGCTGAGGAGAAAAACCAAGGTGTTGGTGGAGCAATGGTACCAAGACAATTTCTTGAGATAACTAATGGAACAACAGAAGTCGAAGATCAAGTATCAAATTCTTCATCTGATGAAAGAACAAGATCAAACACACCTCAGATGAGGAATAGCAATGGTAAAACTGGTAGGGAAGATAGTCCAGAATCAGAAACACAAGGCTGGGGTCCAAACAAGTCTCAGAAAATATTGAACTCTTCCAATGTTGCAGATCAAGCAAATACAGAAGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGTGCTAGATCAGAAGCTTCAATGATAAGTGATGGATGCCAATGGAGAAAATATGGACAAAAAATGGCTAAAGGAAATCCATGTCCTCGAGCATACTATAGATGCACTATGGCAGTTGGTTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCCGAGGACAAAACAATATTGGTAACAACATATGAAGGAACACATAACCATCCACTACCACCAGCAGCTATGGCAATGGCATCAACAACTTCAGCAGCAGCAAGCATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTACCTTGTTCAACAAGCATGGCTACACTTTCAGCTTCAGCACCATTTCCTACTGTTACATTAGATCTCACACAAAATTCAAACCCAAATCCATTACAATTTCAAAGACCTCAACATGCACCATTTCATCAAGTACCTAGTTTCTTTCAAGGACAGAATCAGAATTTTGCACAAGCAGCAGCATCACTTTATAATCAATCAAAATTTTCTGGTCTTCAATTGTCTCAAGAAGTTGGTTCTTCTCATTTAACCACACAAGCTTCAACCCAACAACAACAACAGCCTTCTTTAGCTGACTCGGTCAGCGCCGCCACCGCTGCTATCACCGCCGATCCTAATTTCACCGCTGTTCTCGCAGCCGCTATCTCCTCCATTATTGGTGGTGGCCATGCAAACAATAGCAACAACAACAGCAATAGCAGAAATACAATTAGCAACTTTTCAGGAAACTAA 1662 0.4079 MDKAWGLALDTSSSSPIPISHSHPFLPSKQPSSTHTNDRMFPILGFPVNLTRNTNGEDGGDRKITGEVDFFSERNKPSPSHEHNQHVKSNIIKKEIVSTDEKPSTSNIHVNTGLQLANTGSDQSVVDDGASSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLSHVTGNYTALQLQLVALMQKNHHTENEVVNAKAEEKNQGVGGAMVPRQFLEITNGTTEVEDQVSNSSSDERTRSNTPQMRNSNGKTGREDSPESETQGWGPNKSQKILNSSNVADQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPLQFQRPQHAPFHQVPSFFQGQNQNFAQAAASLYNQSKFSGLQLSQEVGSSHLTTQASTQQQQQPSLADSVSAATAAITADPNFTAVLAAAISSIIGGGHANNSNNNSNSRNTISNFSGN* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0842 553 ProSiteProfiles WRKY domain profile. 299 365 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0842 553 MobiDBLite consensus disorder prediction 119 139 - -
Mtr2g0842 553 PANTHER WRKY TRANSCRIPTION FACTOR 6 40 543 - -
Mtr2g0842 553 MobiDBLite consensus disorder prediction 1 37 - -
Mtr2g0842 553 Gene3D WRKY domain 289 366 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mtr2g0842 553 MobiDBLite consensus disorder prediction 218 276 - -
Mtr2g0842 553 Coils Coil 137 171 - -
Mtr2g0842 553 MobiDBLite consensus disorder prediction 531 553 - -
Mtr2g0842 553 MobiDBLite consensus disorder prediction 8 37 - -
Mtr2g0842 553 SMART WRKY_cls 304 364 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0842 553 Coils Coil 179 199 - -
Mtr2g0842 553 Pfam WRKY DNA -binding domain 306 363 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mtr2g0842 553 MobiDBLite consensus disorder prediction 258 276 - -
Mtr2g0842 553 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 40 543 IPR044810 GO:0003700
Mtr2g0842 553 MobiDBLite consensus disorder prediction 218 250 - -
Mtr2g0842 553 SUPERFAMILY WRKY DNA-binding domain 297 365 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0842 Mtr-Chr2 8526807 8529598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0842 1 542 WRKY Transcription Factor Family AT1G62300 50.997 1.57e-152 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mtr2g0842 WRKY 5.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0842 - - gmx:100802124 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0842 2 8526807 8529598 Mtr2g0842 2 8526807 8529598 ECH
Mtr2g0842 2 8526807 8529598 Mtr4g4940 4 63541489 63543915 ECH
Mtr2g2955 2 43155615 43159333 Mtr2g0842 2 8526807 8529598 ECH
Mtr4g1458 4 25899531 25903066 Mtr2g0842 2 8526807 8529598 ECH