Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0839 ATGTCAATGGATTGGTCTAGAGGCAGAATCATCGGCCGTGGCTCGACTGCCACCGTCTATGTAGCTGATCGTTGCCATTCTGGTGGTGAAGTGTTTGCGGTGAAGTCTACGGAGCTTCACCGATCGGAGTTATTGAAGAAAGAACAACAAATTCTGACCAAGTTAAAGTGTCCTCAAATTGTGAGCTACCAAGGTTGTGAAGTCACCTTTGAAAATGGTGTTCAATTGTTCAACTTGTTCATGGAGTATGCACCCAAGGGAACTCTTTCAGATGCAGTTCGCAATGGAAATGGAATGGAAGAAGCTATGGTGGGATTCTATGCGCGTCAAATTCTGCTAGGGCTTAACTATCTTCATTTGAATGGGATAGTGCATTGTGATTTGAAGGGACAGAACGTGTTGGTGACAGAACAAGGTGCCAAGATTTCAGATTTTGGATGTGCTAGGAGGGTGGAAGAGGAGTTGGTGATTTCTGGGACACCGGCTTTCATGGCACCGGAGGTGGCACGCGGGGAGGAGCAGGGGTTTGCTTCTGATGTATGGGCTTTGGGATGTACTTTGTTGGAGATGATCACCGGGAAAATGCCGTGGCAGGGTTTTTCTGACCCTGCCGCGGTCTTGTATCGGATTGGATTCTCTGGCGATGTGCCAGAGATTCCTGATTATGTTTCGGAACAAGGGAAGGATTTTTTGAGAAAATGTTTGAAGAGAGATCCAAATGAGAGGTGGTCGGTGGTTGAACTTCTTGGCCATGAATTTGTTGGGAAGTTTAAGGATTCCGTGTTTGATTCGGAAACTCCGACCACTGTGTTGGAAGGAGGTTTCTGGGATTGGGATTCTTTGGAAACAACTCAGGATGTGGTCCCAACACTTGAATGTAGTTGTTCCTCGGATTCTTCGAGTCTGCGGAACAGAATCCAAAGTTTGTGTTCTGATGAGGCTTTTTGGGAATCTGATGATGATGATGAATGGGTTACTGTGAGAAGCAATGGTGAGGAGGTGAATGCATTGTCATTTGAAGAAATTGAAGATTATGAATCAGACATTGTTTGTGAACTTGATGATCATGAGATTAGTTTGGTGATTTTTTATGAACCAAAAATTGTAGTTGAATTGAGTAGATGGAATGAGATTTTTGATTATTTGTGTTTTAGAAGCTGCAATTGTGGCTTTTGTGTTAGAGATTTTTTATCAGTTTATCAATGTATAAAGATTGTTCTCTATGTAACAATTGATTCTAAGAACACACAAGTTTTTATCATCCCCTGCTTTCTGCTTTTTTTATTTTTCTTTAATTTCTCATTGGATAGATAA 1314 0.4209 MSMDWSRGRIIGRGSTATVYVADRCHSGGEVFAVKSTELHRSELLKKEQQILTKLKCPQIVSYQGCEVTFENGVQLFNLFMEYAPKGTLSDAVRNGNGMEEAMVGFYARQILLGLNYLHLNGIVHCDLKGQNVLVTEQGAKISDFGCARRVEEELVISGTPAFMAPEVARGEEQGFASDVWALGCTLLEMITGKMPWQGFSDPAAVLYRIGFSGDVPEIPDYVSEQGKDFLRKCLKRDPNERWSVVELLGHEFVGKFKDSVFDSETPTTVLEGGFWDWDSLETTQDVVPTLECSCSSDSSSLRNRIQSLCSDEAFWESDDDDEWVTVRSNGEEVNALSFEEIEDYESDIVCELDDHEISLVIFYEPKIVVELSRWNEIFDYLCFRSCNCGFCVRDFLSVYQCIKIVLYVTIDSKNTQVFIIPCFLLFLFFFNFSLDR* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0839 437 PANTHER MAP KINASE KINASE KINASE 3 348 - -
Mtr2g0839 437 ProSitePatterns Protein kinases ATP-binding region signature. 11 35 IPR017441 GO:0005524
Mtr2g0839 437 SMART serkin_6 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0839 437 SUPERFAMILY Protein kinase-like (PK-like) 4 270 IPR011009 -
Mtr2g0839 437 Pfam Protein kinase domain 7 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0839 437 CDD STKc_MAPKKK 4 254 - -
Mtr2g0839 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Mtr2g0839 437 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 348 - -
Mtr2g0839 437 ProSiteProfiles Protein kinase domain profile. 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0839 437 Gene3D Transferase(Phosphotransferase) domain 1 2 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0839 Mtr-Chr2 8499285 8500678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0839 3 330 MAP Kinase Kinase Kinase AT1G05100 49.563 2.30e-103 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mtr2g0839 Pkinase 3.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0839 K20716 - gmx:100802174 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0839 2 8499285 8500678 Mtr2g0839 2 8499285 8500678 ECH