Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0813 ATGGATCAAAAGACACAAGTGAAACCAGAGGAAAGAAGGAATGATACACAAACACAAAATCAAATAGTGTCAGTGTCTCGCCCTTTGTTTCACACTGCAAATGCTTCTGCCTTTTCATCCTACATGAGTAGAGTTCAAGTCCAAGAAATCTCCCACCAACAACAAAAACAACAAGAATTGCAGAAAAAACTTGGCACCTTCTGGGCAAAACAAAATGAAGAAGTTGAGAAGGTTGTTGATTTCAGAAATAATGGCTTGCCATTAGCAAGGATTAAGAAGATAATGAAAGCAGAAGAAGGAGTGAGTATGATATCAGCTGAGGCACCTATTCTGTTTGCTAAGGCATGTGAAATGTTTATTATGGAGCTTGCAACAAGATCATGGGCTAATGCAGAGGTGAACAAAAGAAAGACACTTCAAAAGAGTGATATTGCATCTGCTGTCTCAAGTAATGAAGTGTTTGATTTCTTAGTTGATATTGTCCCCAGGGAAAACACAATGGAGCGTGACATATTCATGGGTATACCAAGAAGAGAAAATGTTCCTTATTATCTGCCTATGCCGGTTCATGTTCCACCTCAATATGCTGCAGGTCCATCATATGGACCTGCAGGAATGCTTATGGGAAGACATCTTCCCAATCAACCTCCATCACATCCTTTTGCAAATCAAATATTTCCGACCCCAAAGAAAGAAAGCGACCATTCTACTGATTTGCCAAATTCAGACGATTAA 735 0.3946 MDQKTQVKPEERRNDTQTQNQIVSVSRPLFHTANASAFSSYMSRVQVQEISHQQQKQQELQKKLGTFWAKQNEEVEKVVDFRNNGLPLARIKKIMKAEEGVSMISAEAPILFAKACEMFIMELATRSWANAEVNKRKTLQKSDIASAVSSNEVFDFLVDIVPRENTMERDIFMGIPRRENVPYYLPMPVHVPPQYAAGPSYGPAGMLMGRHLPNQPPSHPFANQIFPTPKKESDHSTDLPNSDD* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0813 244 MobiDBLite consensus disorder prediction 214 244 - -
Mtr2g0813 244 MobiDBLite consensus disorder prediction 1 20 - -
Mtr2g0813 244 MobiDBLite consensus disorder prediction 1 15 - -
Mtr2g0813 244 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA 22 176 IPR027170 GO:0003700|GO:0006355|GO:0016602
Mtr2g0813 244 Gene3D Histone, subunit A 47 163 IPR009072 GO:0046982
Mtr2g0813 244 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 22 176 - -
Mtr2g0813 244 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 86 148 IPR003958 -
Mtr2g0813 244 SUPERFAMILY Histone-fold 55 157 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0813 Mtr-Chr2 8266003 8267494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0813 67 221 CCAAT-HAP5 Transcription Factor Family AT3G48590 53.614 2.62e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mtr2g0813 CBFD_NFYB_HMF 6.8e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0813 K08066 - aprc:113855583 182.956