Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0811 ATGTCTTGCTCCAATATCACCATGTTGGTCTCATCCAAACCTTCATTACCTGATGCCTCTAACCTCTCTTTCCGTTCTGCTCTCAACCCTTTTCAGCTTCCTTCACAAAACTCATCATCTTCTTGCACTCCTTCAAGACCAACTCAAATTCAGTGTGGTCTAAGAGAACTCAGAAACCGTATTGATTCTGTCAAAAACACTCAGAAAATCACTGAAGCAATGAAGCTTGTGGCTGCTGCAAAAGTCAGAAGAGCTCAAGAAGCTGTTGTTAATGGCAGACCTTTCTCACAGACACTAGTTGAAGTCCTTTACAGCATCAATGAACAGCTTCAAACCGACGATATCGAAGCTCCTCTAACTAAGCTTAGACCAGTGAAAAAAGTTGCTCTTGTTGTTTGCACTGGTGATAGAGGTCTCTGTGGTGGATTCAACAATGCAATATTGAAAAAAGCTGAAAAAAGGATTGCTGAGTTGAAAGGTCTTGGACTTGATTACACTATTATCAGTGTTGGTAGAAAGGGTAACTCTTATTTCCTTCGTAGACCTTATATACCTGTTGATAGGTTTCTTGAAGGTGGAAACCTTCCTACTGCTAAAGAAGCACAAACTATTGCGGATGATGTTTTCTCACTCTTTGTTAGTGAAGAAGTTGACAAAGTTGAACTTTTGTACACTAAATTTGTGTCATTAGTGAAATCAGAGCCTATAATCCATACTTTGCTTCCACTGTCACCAAAAGGTGAAATCTGTGATATTAATGGAAACTGTGTTGATGCTGCCGAGGATGAGCTTTTCAGGTTAACAACAAAAGAAGGAAAGTTAACTGTTGAAAGAGATGCTGTTAGGTCTAAGACGATTGATTTTTCGCCGATTTTGCAGTTTGAGCAGGATCCTGTTCAGATTCTTGATGCACTTTTGCCACTTTATTTGAACAGTCAAATCTTGAGGGCTTTGCAGGAATCACTTGCTAGTGAATTAGCTGCTAGAATGACTGCTATGAGTAGTGCTTGTGATAATGCTATTGAGTTGAAGAAGAATTTATCAAGGGTTTATAATAGACAGCGTCAAGCTAAGATCACTGGTGAAATCCTGGAAATTGTTGCTGGTGCTGATGCCTTGGTATAG 1125 0.3964 MSCSNITMLVSSKPSLPDASNLSFRSALNPFQLPSQNSSSSCTPSRPTQIQCGLRELRNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSQTLVEVLYSINEQLQTDDIEAPLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEKRIAELKGLGLDYTIISVGRKGNSYFLRRPYIPVDRFLEGGNLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPIIHTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDAVRSKTIDFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMTAMSSACDNAIELKKNLSRVYNRQRQAKITGEILEIVAGADALV* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0811 374 Hamap ATP synthase gamma chain [atpG]. 51 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 53 373 IPR035968 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 CDD F1-ATPase_gamma 54 370 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 PRINTS ATP synthase gamma subunit signature 125 144 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 PRINTS ATP synthase gamma subunit signature 218 235 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 PRINTS ATP synthase gamma subunit signature 320 339 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 PRINTS ATP synthase gamma subunit signature 351 372 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 ProSitePatterns ATP synthase gamma subunit signature. 359 372 IPR023632 -
Mtr2g0811 374 TIGRFAM ATPsyn_F1gamma: ATP synthase F1, gamma subunit 53 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 PANTHER ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC 1 374 - -
Mtr2g0811 374 Pfam ATP synthase 54 373 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 Gene3D - 116 244 - -
Mtr2g0811 374 Coils Coil 54 74 - -
Mtr2g0811 374 PANTHER ATP SYNTHASE GAMMA CHAIN 1 374 IPR000131 GO:0015986|GO:0045261|GO:0046933
Mtr2g0811 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 53 104 - -
Mtr2g0811 374 Gene3D ATP synthase, gamma subunit, helix hairpin domain 276 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0811 Mtr-Chr2 8233037 8234670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0811 30 373 Primary Pumps ATPases AT1G15700 70.435 1.66e-177 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0811 K02115 - thj:104818017 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0811 2 8233037 8234670 Mtr2g0811 2 8233037 8234670 ECH