Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0803 ATGTCGACGGTGTACGTTTTGGAACCGCCGACAAAGGGAAAAGTGATCGTGACCACCACGCGCGGCCCCATCGATATTGAACTATGGCCTAAAGAAGCTCCCAAAGCCGTTAGAAACTTCGTTCAACTTTGCCTCGAAGGTTACTACGATAACACCATCTTCCACCGTATCATCAAAGGCTTCCTCGTTCAGTGCGGCGATCCCACTGGCACCGGCACCGGAGGTGAGAGTATTTATGGAGATGTGTTTGGTGATGAGTTTCATTCGAGGATTAAGTTTAAGCATAGAGGTTTGGTTGCAATGGCGAATTCTGGAACACCGAATTCTAATGGAAGTCAGTTTTTCGTTACTCTTGATCGTTGTGATTGGCTTGATCGGAAGCATACCATTTTCGGAAAGGTGACAGGAGATACATTGTATAATCTGTTGAGACTTGGTGACGCTGAGACTGATAAGAATGATCGGCCTTTAGATCCCCCAAAGATATTATCAGTTGAGGTGTTGTGGAACCCCTTTGAGGACATTGTTCCAAGAACACTTCAGAAACCTCAGACCAAAGCTACACGTGATGGTGATACAGAGGGTAAAAATGAAAAGAAGAAAGGTGTAAAAAATTTGAGTTTGCTTTCATTTGGGGAAGAAGCTGAAGAAGAGGAAAAGGAATTGGCAGTGGTGAAGAAAAAGATTGTGAGCAGCCATGATGTCTTGAATGATCCTCGCCTTCTAAAGGACGAAAATGCTAATAATGAATTGAGTTCATCCGACAGTAAAATAAAAAAAGATCGGCAGTTATCTGTAAGGGATGCACTTAACTCTAAAAAAGAAGAGCCTCAGAAAGATTCGGAAGCTGATAAATTGGCTCATCTTAATTCCAGTGATGATGATGAAGCAGATTTTGATACAAGAATGCGCATGCAAATACTCAAAAAGCGGAAGGAACTGGATGTTCTGCCGCCCAAACCAAAGTTGAAAAATGGAAGGTCCAGGTCCAGTCCAGAGAACCGTACTTTGTCAAGAGCTAGGTCCAACTCCGTAAGTGGTGACGAGGATCAACCAAGAGTGGAAAAATTGTCCATGAAGAAAAAGGGAATAGGATCCGAAGCAAGAGCTGAACGAATGGCTAATGCAGATACAGATATGCAGCTTCTGAATGAAGCTGAGAGAGGAAGACAACTGCAGAAGCAGAAGAAACGCAAACTTCAAGGGCGTGAAGAGGAAGTTCTGGCAAAACTTGAGAAGTTTAAAACCAAGGTATCAGCAAAGGAGACACCCACAACTGTTGAATCTAAACATGCTAATGATGAGGAATTAACTGACTGGAGTAGTGTTACCTTGAAATTTTCCCCCGGAGTTGGCAAGGACCACATGTCTCGCAAAGAGGATCCAAATGATTATGTTGTGCATGACCCACTTTTGGAAAAGGGGAAAGAGAAGTTTAATAAGATGCAAGCCAAACAAAAGAGACGAGAACGGGAATGGGCTGGGAGATCTCTTACTTGA 1500 0.4327 MSTVYVLEPPTKGKVIVTTTRGPIDIELWPKEAPKAVRNFVQLCLEGYYDNTIFHRIIKGFLVQCGDPTGTGTGGESIYGDVFGDEFHSRIKFKHRGLVAMANSGTPNSNGSQFFVTLDRCDWLDRKHTIFGKVTGDTLYNLLRLGDAETDKNDRPLDPPKILSVEVLWNPFEDIVPRTLQKPQTKATRDGDTEGKNEKKKGVKNLSLLSFGEEAEEEEKELAVVKKKIVSSHDVLNDPRLLKDENANNELSSSDSKIKKDRQLSVRDALNSKKEEPQKDSEADKLAHLNSSDDDEADFDTRMRMQILKKRKELDVLPPKPKLKNGRSRSSPENRTLSRARSNSVSGDEDQPRVEKLSMKKKGIGSEARAERMANADTDMQLLNEAERGRQLQKQKKRKLQGREEEVLAKLEKFKTKVSAKETPTTVESKHANDEELTDWSSVTLKFSPGVGKDHMSRKEDPNDYVVHDPLLEKGKEKFNKMQAKQKRREREWAGRSLT* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0803 499 Coils Coil 383 403 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 452 499 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 185 201 - -
Mtr2g0803 499 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 15 167 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 28 43 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 98 113 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 125 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 126 141 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 MobiDBLite consensus disorder prediction 346 374 - -
Mtr2g0803 499 PANTHER SPLICEOSOME-ASSOCIATED PROTEIN CWC27 HOMOLOG 5 204 - -
Mtr2g0803 499 CDD cyclophilin_CeCYP16-like 8 179 - -
Mtr2g0803 499 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 204 IPR044666 -
Mtr2g0803 499 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 22 167 IPR002130 GO:0000413|GO:0003755
Mtr2g0803 499 Gene3D - 2 182 IPR029000 -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 254 329 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 240 375 - -
Mtr2g0803 499 SUPERFAMILY Cyclophilin-like 14 184 IPR029000 -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 417 436 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 179 201 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 330 345 - -
Mtr2g0803 499 MobiDBLite consensus disorder prediction 448 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0803 Mtr-Chr2 8159171 8166393 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0803 9 172 U-box Gene Family AT5G67530 48.171 2.65e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0803 K12737 - gmx:100793148 764.607