Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0802 ATGAGTGACTCAAAGTATGCAACCACTGCAAACAATGGCCAGTATGTCTCTTCAGATCAGATGAATCGCGAGGATGTGCTGGAATTTTCCCCAGAAGAGGAAGATATCGTTGCGAAAATGTTTAGATTGGTCGGAAAGAGATGGCATCTCATTGCTGGAAGAATCCCTGGAAGAACCCCAGAAGATATTGAAAAGTATTGGACCTCAAAGTTCTCATCATCAACTGCATGCTAA 234 0.4274 MSDSKYATTANNGQYVSSDQMNREDVLEFSPEEEDIVAKMFRLVGKRWHLIAGRIPGRTPEDIEKYWTSKFSSSTAC* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0802 77 CDD SANT 28 67 IPR001005 -
Mtr2g0802 77 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 75 IPR017930 -
Mtr2g0802 77 SUPERFAMILY Homeodomain-like 29 71 IPR009057 -
Mtr2g0802 77 Gene3D - 28 71 - -
Mtr2g0802 77 ProSiteProfiles Myb-like domain profile. 29 71 IPR001005 -
Mtr2g0802 77 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 74 - -
Mtr2g0802 77 Pfam Myb-like DNA-binding domain 28 68 IPR001005 -
Mtr2g0802 77 PANTHER MYB TRANSCRIPTION FACTOR 1 74 - -
Mtr2g0802 77 SMART sant 25 73 IPR001005 -
Mtr2g0802 77 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0802 Mtr-Chr2 8150964 8151918 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0802 29 72 MYB Transcription Factor Family AT5G52600 45.455 2.80e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr2g0802 Myb_DNA-binding 9.9e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0802 - - mtr:MTR_2g023100 160.999