Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0774 ATGGCTACTTTCACCTCCTTCTCTTCTCCATCATCATCATCTTCCACTCCTCCTCCTTTCTCAGCTCCATCCTCTTCTTCAGCTTTTGATGATGACTCTTTTGAAGATTCTTGCAGTATTTGCTTAGAATCCTTCAGTGTTCATGACCCATCTACTGTTACCTGTTGCAAACATGAATATCACCTGCATTGTATTCTTGAATGGTCACAGAGAAGCAAAGAGTGCCCGATATGTTGGCAATCACTTTCTTTGAAAGACCCTGCCTGCCAAGAGCTTCTTGATGCAGTGGAGGCTGAAAAAAGCTTAAGATCAAGAAACAATCATTCACCTTCACTTGCTAATTCTCGTGTCCCCTTTGGATATTCTAATGGTGATCATGATGATTCCTCAGATGAAATTGATTTTGATGAGGAAATTATGCAGCACCTATATGCTGCTGCAAGTAGAGCTCGTTTTGTTCAGAGACAGAGAAGACAGGGATCGTCTGGAGCAGGTCCATCAGAGATTCTTGTTTTCAACTCTTCTGGGCCTGTATCTGGGATGCAATCAACACTTACAACTTCACCAGCTGGCGGTAGCTCACCGACCACTGATCTACCATCAACTGCCAACGCTCGACCTGAGGTTGCAAGAAACACTAGTCCTGAGGTTGATGTCCCTTACAGACCAAGAGTTCTTTACAGTCCATCACCACCTCAGGATGAGAGGAAACTAAATACTTCTGAGATGTTCTCCTTTCCCGAGTCCTTCAAATCTAAATTTTCTGCTGCTTCAGCTAGATATAAGGAATCAATTTCTAAAAGTACTCGTGGCCTTAAAGAGAAGTTACTGGCTCGTAATGTCACAGTAAAAGAGCTGAGTAAAGGTGTTCAACGTGAGATGAATGCTGGCATAGCTGGAGTTTCACGTATGATTGAACGCCTTGATCTTGCCTCAAAAAGGTCAGGTTCTCCTCTAATTCCTGTCCGTAATGGGGGAACTTCAGGCTTTTCCGAAGGGAAGTCTGTTGAAGAGAAAGACACTGGAAATTCTAAAACTGAAGCAAGTGGAAGTTCAGATGCCCCCTCACACATTTCTAGCACTGTTGCTAGTCGAATGGAAATTCCTCCATATGTTCAGAGAGGACATGATGCTGTGAAGACTTAG 1146 0.4346 MATFTSFSSPSSSSSTPPPFSAPSSSSAFDDDSFEDSCSICLESFSVHDPSTVTCCKHEYHLHCILEWSQRSKECPICWQSLSLKDPACQELLDAVEAEKSLRSRNNHSPSLANSRVPFGYSNGDHDDSSDEIDFDEEIMQHLYAAASRARFVQRQRRQGSSGAGPSEILVFNSSGPVSGMQSTLTTSPAGGSSPTTDLPSTANARPEVARNTSPEVDVPYRPRVLYSPSPPQDERKLNTSEMFSFPESFKSKFSAASARYKESISKSTRGLKEKLLARNVTVKELSKGVQREMNAGIAGVSRMIERLDLASKRSGSPLIPVRNGGTSGFSEGKSVEEKDTGNSKTEASGSSDAPSHISSTVASRMEIPPYVQRGHDAVKT* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0774 381 MobiDBLite consensus disorder prediction 1 30 - -
Mtr2g0774 381 SMART ring_2 38 78 IPR001841 -
Mtr2g0774 381 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 4 364 - -
Mtr2g0774 381 MobiDBLite consensus disorder prediction 315 381 - -
Mtr2g0774 381 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF1A 4 364 - -
Mtr2g0774 381 MobiDBLite consensus disorder prediction 345 363 - -
Mtr2g0774 381 ProSiteProfiles Zinc finger RING-type profile. 38 78 IPR001841 -
Mtr2g0774 381 MobiDBLite consensus disorder prediction 101 131 - -
Mtr2g0774 381 MobiDBLite consensus disorder prediction 155 238 - -
Mtr2g0774 381 SUPERFAMILY RING/U-box 35 85 - -
Mtr2g0774 381 Pfam Ring finger domain 36 78 IPR001841 -
Mtr2g0774 381 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 108 IPR013083 -
Mtr2g0774 381 MobiDBLite consensus disorder prediction 155 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0774 Mtr-Chr2 7936719 7940570 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0774 32 86 C3H Transcription Factor Family AT4G00335 47.273 1.85e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0774 K19043 - gmx:100785684 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0774 2 7936719 7940570 Mtr2g0774 2 7936719 7940570 ECH