Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0753 ATGGGTATTACGTGGAGTAACAGAAGAAGAAACAATTTCATTCAAAACCCACCTCCACAACCACCACAACTTCCACCACCACCGCCACCACCACCTTACTATTACTCATCAGAATCACACCATCCACCACCACCACCACCACCTCAACAAAGTTACTACTATCCCCCCTCAACTACTCCTTACACCCCACAACCTCAACCACAACCCCATTCATTCTACTTCTCCAACCCTAACAATAACTATCCTCCCAATTCTACTACCAATCGTATTCAATATCATCCTTCTTATCATCTCAATCAACAACACCAACAACAACCGCAATATGCATGGCCTCCACCGCCTCCCTCTTTTTACGCTCCTGCTGCTGCTTCTTCCACCCCACCTCCTTATGTTGATCATCAAACTGCTAAAAAGATTAGAAACAATGTTAATGTTCATAAAGATACGCTTCGCCTTGAGGTTGATCAGCATAACCCTGATCATTACCTTGTTTCTTTTGTTTTCGATGCCGTCTTTGATGGAAGCATTACTGTCTTTTACTTTGCGAAGGAAGAAGATAAATGTAGGTTTGTTCCACTCTTTCCTGATGCATTTGTGCCAGTCAAAGTCCCCTTCAAGAAAGGAGTTGGCCAGAAATTTGCTCAGCCTTCAGGAACGGGGATTGACCTAGGCTTCTTTGAGTTAGATGATCTTTCAAAGCCTTCACCTGGGGAAGATGTCTTTCCTCTTGTAATATGCGCCGAAACATGTTTGGAAACTCCCTCGGAAAACGAAACTCCTAAAACTCCTGATGATTCCGTGCTAGATGCATCCCCTCACATGCAAATTACTCAAGCTGTCTTGGAGAAAAGTAATGGTGGTGGTGCTTTCCAGATAAAAGTAGTTAGACAGATTCTTTGGATTGATGGTGTTCGTTATGAGTTGAGAGAACTATATGGAATAGGAAGCTCAGAAGCTGCAGGCTTTGATGACAGTGATCCTGGGAAGGAGTGTGTAATATGCATGACGGAACCAAAGGATACAGCTGTCTTACCTTGTCGACATATGTGTTTGTGCAGTGAGTGTGCGAAAGCTCTGCGGCTTCAATCCAATAAATGCCCTATATGCCGTCAGCCAATTGAGGAACTTATGGAAATCAGGGTGAAGAGTAGCGATCCATGA 1161 0.4384 MGITWSNRRRNNFIQNPPPQPPQLPPPPPPPPYYYSSESHHPPPPPPPQQSYYYPPSTTPYTPQPQPQPHSFYFSNPNNNYPPNSTTNRIQYHPSYHLNQQHQQQPQYAWPPPPPSFYAPAAASSTPPPYVDHQTAKKIRNNVNVHKDTLRLEVDQHNPDHYLVSFVFDAVFDGSITVFYFAKEEDKCRFVPLFPDAFVPVKVPFKKGVGQKFAQPSGTGIDLGFFELDDLSKPSPGEDVFPLVICAETCLETPSENETPKTPDDSVLDASPHMQITQAVLEKSNGGGAFQIKVVRQILWIDGVRYELRELYGIGSSEAAGFDDSDPGKECVICMTEPKDTAVLPCRHMCLCSECAKALRLQSNKCPICRQPIEELMEIRVKSSDP* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0753 386 PANTHER E3 UBIQUITIN-PROTEIN LIGASE LUL3-RELATED 1 385 - -
Mtr2g0753 386 PANTHER MAHOGUNIN 1 385 IPR045194 GO:0061630
Mtr2g0753 386 MobiDBLite consensus disorder prediction 15 67 - -
Mtr2g0753 386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 380 IPR013083 -
Mtr2g0753 386 MobiDBLite consensus disorder prediction 1 91 - -
Mtr2g0753 386 ProSiteProfiles Zinc finger RING-type profile. 331 370 IPR001841 -
Mtr2g0753 386 SUPERFAMILY RING/U-box 330 377 - -
Mtr2g0753 386 MobiDBLite consensus disorder prediction 68 91 - -
Mtr2g0753 386 PIRSF SBP1_RNase_bind 35 161 IPR017066 -
Mtr2g0753 386 PIRSF SBP1_RNase_bind 313 382 IPR017066 -
Mtr2g0753 386 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 330 370 IPR045195 -
Mtr2g0753 386 Pfam Zinc finger, C3HC4 type (RING finger) 329 375 - -
Mtr2g0753 386 SMART ring_2 331 369 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0753 Mtr-Chr2 7700744 7706954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0753 33 385 C3H Transcription Factor Family AT3G06140 52.381 5.98e-106 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0753 - - vra:106775674 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0753 2 7700744 7706954 Mtr2g0753 2 7700744 7706954 ECH