Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0712 ATGATTGTAAAGGAGCATCCGGTTGGTACTGAACTGGTAATGAGTAATACAATTGGGGAGGATGAAATAGATTTTTCTTGTGATCCATACATAGGGTTAGAGTTTTTTAATGCTGATGATGCACTTAAGTTCTATATATCGTATGGTAATCGAATGGGATTTAAAGTTCGGATTGGTCAACTTTATCGATCGAGAACTAATGGGTCGGTTTCTTCTAGAAGATTTGTGTGTTCGAAGGAAGGACATCAGCTCAGCTCAAGAACTGGTTGTCCGGCGTTCATAAGGGTGCAGTTAAATGATTCTGGAAAGTGGGTTGTTGATCATTTTCATAAGGATCATAACCACAATCTTGAAAATGAAAGTGAAAGTTTCGCTCCAACATTGCAGCCGAAGGCTTCTGCAGCTATTGAGTCTTCTACTGAAGTCACTCGCAAGCCGAGGAAGAAAATGCTTGAAGTAGGGAATGGTGAACCTATTTCTCCCTTTGGCGTTATTAATTTCAAGCGTATGAGAAAAGAAGAACTTGAAGTACAAGCCAGGATCGAACCATATGTTGGTCAAGAGTTCAGTACCCCTAATGAAGCCTACCAATTTTATCATGCTCATGCAGCATATATGGGTTTTGGAATTCGAGTCGGTCAATTGTTTCGTTCTAAAAATGACGGATCAATTACATCACGACGCTTTGTGTGCTCAAAAGAAGGGTTCCAGCACCCTTCCAGAGTTGGCTGTAAGGCTTATTTGAGGATTAAGAATCAACCATCAGGAAAGTGGGTAGTCGACCGTCTTGAAAACGATCATAATCATGATCTGGGCCTTGAAAAGGAACGTAAGACAAAAAGTCTTCCTGCTTCCAACATTTTGACCGAGGAGGTAAACACTGAATTGGTGAATGGCGACATATTTAGGATAGATAACTACCCTGTCCTAAGAGGGGCTAGACAAAATCACATTAGAAGTGATTGGTACAACATGCTTTTAGAGTATTTTCAGTCAAGGCAAGCAGAAGATACAGGATTCTTTTATGCCATGGAAGTTGATAATGGTAATTGCATGAGCATATTTTGGGCTGACGGAAGATCTAGATACTCATGTAGTCAGTTTGGCGATGTCCTCGTTGTAGATACATCATATAGAAAGAGTGTTTATATGGTACCATTTGCTACTTTTGTTGGAGTTAACCACCACAAGCAGCCCGTGCTTCTTGGATGTGCTCTAATTGCTGATGAATCTGAAGAGTCTTTCACTTGGTTGTTTCAGACATGGGTAAGAGCAATGTCTGGCCGGCAGCCTCTGTCAGTAATAGCTGATCAAGATGTTTCAATCCAGAGGGCCATAGCAAAAGTCTTTCCAGTAACCAATCATCGCTTTTCGTTGTGGCAAATTAATGCAAAGGAACAAGAGCTCGCCGGTCTGATGGGTAATGGGTTCACTAAAGATTATGAAAAGTGCGTTTACCAGAGCCAGACAGTCGATGAATTTGACGCCTCGTGGAATGCTTTACTCGTCAAATATGGATTGAAGGACAATGCTTGGCTAAAAGAAATGTATGAGAAGCGTGCATCCTGGGTTCCGTTCTATTTAAAGGGCACATTTTCTGCTGGAATTCCTATGAAAGAAAGCATGGAATCATTCTTTGGTGGAAGTTTAAATGGCCAAACACCTCTCATAGAGTTCATTCCGCGTTATGAAAGAGGTCTCGAGCGACGTCGTGAAGAAGAAAGGAAAGAGGATTTTAATACTTCCAATTTTCAAACTTTTTTGCAAACGAAAGAGCCAGTAGAAGAACAGTGTAGAAGGCTTTACACTCTTGCAGTATTCAAAGTATTTCAGAAAGAGCTTTTGCAGTGCTTTAGTTATCTTGGGTTTGCAATCTACGAACGAGGGTCCCTCAGCAGATATTTGGTGCGTAAGTGTGGAAATGATGATATGGTGAAGCATGTAGTTACATTCAATGCATCCAATCTTGACATTAGTTGTAGCTGTCAGATGTTTGAATATGAAGGCGTTCTTTGTAGACACGTGTTGAGGGTTTTTCAAATATTGGAAGTAAGAGAAGTTCCTTCTCGCTACATCTTACACCGATGGACGAGAAATGCCGAGGATGGTGTTTTTCCCGACATAGGATCATGGAGTAGCTCTCAGGAGCTAAAAAGTTTGATGCTATGGAGTCTAAGAGAAACAGCATCTAAATACATAGATGCTGGTGCATCATCAATTGAAAAGTATAAACTTGCGTATGAGATTTTACGAGAGGGCGGGAGAAAACTTTGTCGGCACAGAGAAGTACTTTATGCCACTTGTGAGCTTTGGAGACAAGCGTGTGTTTGTTTGTTTGCATGGAGAAACCACTTCCCACTATCTTCTCTTCTCACTTTGGAAAGTACAAATGAGAGCCTTATAGTTTAA 2409 0.4089 MIVKEHPVGTELVMSNTIGEDEIDFSCDPYIGLEFFNADDALKFYISYGNRMGFKVRIGQLYRSRTNGSVSSRRFVCSKEGHQLSSRTGCPAFIRVQLNDSGKWVVDHFHKDHNHNLENESESFAPTLQPKASAAIESSTEVTRKPRKKMLEVGNGEPISPFGVINFKRMRKEELEVQARIEPYVGQEFSTPNEAYQFYHAHAAYMGFGIRVGQLFRSKNDGSITSRRFVCSKEGFQHPSRVGCKAYLRIKNQPSGKWVVDRLENDHNHDLGLEKERKTKSLPASNILTEEVNTELVNGDIFRIDNYPVLRGARQNHIRSDWYNMLLEYFQSRQAEDTGFFYAMEVDNGNCMSIFWADGRSRYSCSQFGDVLVVDTSYRKSVYMVPFATFVGVNHHKQPVLLGCALIADESEESFTWLFQTWVRAMSGRQPLSVIADQDVSIQRAIAKVFPVTNHRFSLWQINAKEQELAGLMGNGFTKDYEKCVYQSQTVDEFDASWNALLVKYGLKDNAWLKEMYEKRASWVPFYLKGTFSAGIPMKESMESFFGGSLNGQTPLIEFIPRYERGLERRREEERKEDFNTSNFQTFLQTKEPVEEQCRRLYTLAVFKVFQKELLQCFSYLGFAIYERGSLSRYLVRKCGNDDMVKHVVTFNASNLDISCSCQMFEYEGVLCRHVLRVFQILEVREVPSRYILHRWTRNAEDGVFPDIGSWSSSQELKSLMLWSLRETASKYIDAGASSIEKYKLAYEILREGGRKLCRHREVLYATCELWRQACVCLFAWRNHFPLSSLLTLESTNESLIV* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0712 802 Pfam SWIM zinc finger 652 680 IPR007527 GO:0008270
Mtr2g0712 802 SMART 26again6 658 685 IPR006564 GO:0008270
Mtr2g0712 802 Pfam MULE transposase domain 371 464 IPR018289 -
Mtr2g0712 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 148 759 IPR031052 GO:0006355
Mtr2g0712 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 121 IPR031052 GO:0006355
Mtr2g0712 802 ProSiteProfiles Zinc finger SWIM-type profile. 645 683 IPR007527 GO:0008270
Mtr2g0712 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 26 121 - -
Mtr2g0712 802 PANTHER PROTEIN FAR1-RELATED SEQUENCE 12-RELATED 148 759 - -
Mtr2g0712 802 Pfam FAR1 DNA-binding domain 197 271 IPR004330 -
Mtr2g0712 802 Pfam FAR1 DNA-binding domain 43 117 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0712 Mtr-Chr2 7215926 7220069 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr2g0712 MULE 3.2e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0712 - - gmx:100816656 1300.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0712 2 7215926 7220069 Mtr2g0712 2 7215926 7220069 ECH