Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0706 ATGGGTTGTGTTCACGGAAAGTGTTGTAGTCGTTATCCTGCACCATCAATTGGTGGCTCTAGGGATTATAGAGAACCTGTCCCTAAGAAGCACATACTCACACAAAGGTCACTTCACTTTGTTGATGTTGCTTCACACAATTTCACTATGGAATACTCTGTACTCACTCAGAGAGGTTACTATCCTGATTCACCTGATAAGGAAAACCAAGATTGTTATTGTGTTAGGACACAATTGCAAGGTAATCCTAGTGTTCATTTCTTTGGTGTTTATGATGGACATGGTGAATTTGGTGGACTGTGTTCTAATTTTGTTAAGAATAAGTTGGTTGAGAAATTGTCTAATGATTCTGCATTGTTAGAGGATCCTGTTAAGGCTTATAATTCGGCTTTTTTGGCTACGAATGATGAGTTGCATAAAAGTGAGATTGATGATTGTATGAGTGGTACTACTGCGATTACGGTGCTTGTGATAGGGGATACACTTTATGTTGCGAATGTTGGTGATTCGAGGGCAGTGTTGGCTGTTAAGGATGGGAATAGAATTGTAGCTCAGGATTTGTCTTCTGATCAGACACCATTTAGGAGAGATGAATATGAGAGAGTGAAGCTTAGTGGTGCTAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCTGATATTCAGACTTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCTAGATTGTGGGTTCAGAATGGGATGATTCCTGGAGCTGCTTTTACAAGGAGTGTAGGGGATAGTTTGGCCGAGACTATAGGTGTTATTGCGGTTCCGGAGGTGTTAACGGTTCAGCTTAAGCCGGATCATCTTTTCTTTGTCGTTGCAAGTGATGGTGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCTGCAAGTTATTCAGATCCTCGTGATGCATGTGCTGCCATTGCTGGAGAGTCTTACAAATTATGGTTGGAACATGAGGGTCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCCCGTCTCATTCAGGTACATCTGAGTACGGATCAGGAGAGATCAATGTCAGTACAATAACGAGGGCCAAAAAGGGAAAGGGAACTTCTGGTATATCTGCTTCCGCCGGTTTGGATGTTCATCGTGCTGTGACGAATGGTTTCTCTGATTCGCTATCCGGTCAACATGTGGTCTCAACAAGAAGTCACGCCATTGTAGTTCCCTCTCCCACATTTCAAAGTCCAATTGAATTGTGA 1263 0.4252 MGCVHGKCCSRYPAPSIGGSRDYREPVPKKHILTQRSLHFVDVASHNFTMEYSVLTQRGYYPDSPDKENQDCYCVRTQLQGNPSVHFFGVYDGHGEFGGLCSNFVKNKLVEKLSNDSALLEDPVKAYNSAFLATNDELHKSEIDDCMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAQDLSSDQTPFRRDEYERVKLSGARVLSVDQVEGHKDPDIQTWGDEESQGDDPPRLWVQNGMIPGAAFTRSVGDSLAETIGVIAVPEVLTVQLKPDHLFFVVASDGVFEFLSSQTVVDMAASYSDPRDACAAIAGESYKLWLEHEGRTDDITIIIVQIKGPSHSGTSEYGSGEINVSTITRAKKGKGTSGISASAGLDVHRAVTNGFSDSLSGQHVVSTRSHAIVVPSPTFQSPIEL* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0706 420 Gene3D - 36 343 IPR036457 -
Mtr2g0706 420 ProSitePatterns PPM-type phosphatase domain signature. 87 95 IPR000222 GO:0043169
Mtr2g0706 420 Pfam Protein phosphatase 2C 78 316 IPR001932 -
Mtr2g0706 420 CDD PP2Cc 67 341 IPR001932 -
Mtr2g0706 420 SMART PP2C_4 47 339 IPR001932 -
Mtr2g0706 420 ProSiteProfiles PPM-type phosphatase domain profile. 51 341 IPR001932 -
Mtr2g0706 420 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 29 368 - -
Mtr2g0706 420 SUPERFAMILY PP2C-like 37 343 IPR036457 -
Mtr2g0706 420 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 29 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0706 Mtr-Chr2 7137723 7141557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0706 1 346 PP2C-type Phosphatase Gene Family AT3G06270 71.920 5.12e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0706 - - mtr:MTR_2g020970 849.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0706 2 7137723 7141557 Mtr2g0706 2 7137723 7141557 ECH
Mtr4g4307 4 57153062 57157605 Mtr2g0706 2 7137723 7141557 PCT