Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0687 ATGGAATCCAAATCTCAACCAATTCTCCCTCCAATGGATCCTCCCGAAGATCTCTCCTCCGTTTGGGACCTCTCTTACCTCCTCGACTTCGATGACGATATTCCACAACTCCCGCCTCTTCCTAACCCTAATCCTACTCCAGAAGAAAACGAGAGGATCCGAAAGCGTGACCCGAGGTTAACTTGCTCCAACTTTCTCGCGGGTCAAGTACCATGTGCATGCCCTGAACTCGATGCTTTGTTAGAGGATAACGGTTTACCAGGAAAGAAACGAGCTCGAACTGCACGCGCGGCTGCATCGGCGCGTTGTCAAGTTCCTGGTTGTGAAGTTGATATCTCTGAGCTTAAAGGCTATCATCGACGGCATAGGGTTTGTTTGCGGTGTGCTAATGCTGCTACTGTTGTTCTTGATGGTGATGTGAAGAGATACTGCCAACAGTGTGGGAAGTTTCATGTTTTATCGGATTTCGATGAAGGGAAACGGAGTTGTAGAAGGAAATTGGAGCGGCATAATACTCGGAGGAGGAGAAAGGCCGTAGATTCTGCAGTAGGAGTTGATAATGAAGTTCAAACTGTTACTCAAAATGATGATTCCAATTGTGATGGAGAACTAGGAATAGATTATTCGAATTTGAGTAGGGAGAATATCGAAAAAAGAGCGTTGCAGGATCATGAAGAAGAACCGGTTGTTAATGGTTCGTCAACACCAGAGACACAGAATATTAATGGTGACAGTGTCGTTTCCTTTGTTGCTTCTGCTGAAACACAAGCGAATATTGGAAAAGATGTTTCCGATCCTTCTAAGTCGCCTTCATATTGTGACAATAAGAGTGATTATTCGTCTATGTGCCAAACAGGTCGGGTTTCTTTTAAGCTTTACGACTGGAATCCTGCGGAATTTCCGAGAAGGCTGCGGCTCCAAATATTTCAATGGTTGGCAAGTATGCCTGTAGAGCTGGAGGGATATATCCGCCCTGGGTGTACTATCCTGACAATTTTTATTGCAATGCCAAATATTATGTGGATAAATTTACTCAAAGACCCTATGTATTATGTGCGTGATCTTGCTGCTCCCAGAAATATGCTATCTGGAAGAGGAACCGCTCTAATTCATCTGAATGATATGATCTTCCGTGTAATGAAAGATGGAATTTCTGTGACAAAAGTCGAGGTAAACATGCAGGCACCTAGGCTTCACTATATTCATCCCACATGCTTTGAAGCAGGAAAACCCATGGAATTTTTTGCCTGTGGAAGTAACTTGCTGCAGCCTAAATTTCGGCTTCTTGTATCATTTTATGGAAAGTATCTGAAGTGTGAGTATTGCGCTCCGTCTCCACATAACTCGGCTGAAGACAATATTTCTTGTGCTTTTGATAATCAGTTATATAAGATATGTGTCCCTCATATTGAGGAAAATCTCCTGGGGCCTGCATTTATTGAGGTTGAGAATGAGTCTGGTTTATCAAACTTTATTCCTGTACTTATTGGGGATAAAGAAATTTGCACTGAATTGAAGATATTGCAACAAAAACTAGACGCTTCTCTCCTTTCTAAACAATTTCGGTCTGCATCTGGTAGTTCTATTTGTAGCTCATGTGAAGCTTTTGTACATATTCACACATCATCATCAGACTTGCTTGTAGATATAGCATGGTTACTTAAAGACCCTACTTCAGAAAATTTTGACAGAATGGTATCTGCTTCACAGATTCAAAGATATTGCTATTTGTTGGATTTTCTAATATGCAATGATTCAACTATCATCTTGGGAAAAATATTGCCAAATTTGATAAGCATAACGAAAAGCATGAAATCCAATATAAGTGATGTTGACATGGACCAACTGCTGAAGGGCATGTGTAATGCTAGAGATGCTATTTGTCGGAAAGGTGGAGGTATAGTTTTGAACTCCAAAATGGAAGGCTTCAAACCTGCTCAGTGCAGTTCCCAAAATGCCAAGCTATCAGTTGTTGAAGTTAACAGTCAGGGTATCCAGTTTAGAGCAGATGCAGAGTTGGGAGTTCTGAGCAGTCTCGCTTCTGATGAAAAAAATCAGAAGATACCGCTTTTGAAAAGGGATATTATAATGAATATGGAAGAGTTGCCTAAAAGATGTGACCATCAAAATCTTACCCGGGGATTCTTGAGATCTCGACCAACTACTTTTGTGCTTGTATCACTTGTTGTTTGTCTTGCAGTATGTGTATCCGTCTTTCATCATGGGAGGGTTAACGAGTTGGCAGTATCCATTAGAAGGTGTTTGTTCAACCATTGA 2277 0.4133 MESKSQPILPPMDPPEDLSSVWDLSYLLDFDDDIPQLPPLPNPNPTPEENERIRKRDPRLTCSNFLAGQVPCACPELDALLEDNGLPGKKRARTARAAASARCQVPGCEVDISELKGYHRRHRVCLRCANAATVVLDGDVKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNTRRRRKAVDSAVGVDNEVQTVTQNDDSNCDGELGIDYSNLSRENIEKRALQDHEEEPVVNGSSTPETQNINGDSVVSFVASAETQANIGKDVSDPSKSPSYCDNKSDYSSMCQTGRVSFKLYDWNPAEFPRRLRLQIFQWLASMPVELEGYIRPGCTILTIFIAMPNIMWINLLKDPMYYVRDLAAPRNMLSGRGTALIHLNDMIFRVMKDGISVTKVEVNMQAPRLHYIHPTCFEAGKPMEFFACGSNLLQPKFRLLVSFYGKYLKCEYCAPSPHNSAEDNISCAFDNQLYKICVPHIEENLLGPAFIEVENESGLSNFIPVLIGDKEICTELKILQQKLDASLLSKQFRSASGSSICSSCEAFVHIHTSSSDLLVDIAWLLKDPTSENFDRMVSASQIQRYCYLLDFLICNDSTIILGKILPNLISITKSMKSNISDVDMDQLLKGMCNARDAICRKGGGIVLNSKMEGFKPAQCSSQNAKLSVVEVNSQGIQFRADAELGVLSSLASDEKNQKIPLLKRDIIMNMEELPKRCDHQNLTRGFLRSRPTTFVLVSLVVCLAVCVSVFHHGRVNELAVSIRRCLFNH* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0687 758 Gene3D - 98 164 IPR036893 GO:0003677|GO:0005634
Mtr2g0687 758 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 19 756 - -
Mtr2g0687 758 ProSiteProfiles Zinc finger SBP-type profile. 100 177 IPR004333 GO:0003677
Mtr2g0687 758 SUPERFAMILY SBT domain 101 181 IPR036893 GO:0003677|GO:0005634
Mtr2g0687 758 MobiDBLite consensus disorder prediction 33 55 - -
Mtr2g0687 758 Pfam SBP domain 103 177 IPR004333 GO:0003677
Mtr2g0687 758 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 19 756 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0687 Mtr-Chr2 6959494 6967072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0687 7 752 SBP-box Gene Family AT5G18830 45.754 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mtr2g0687 SBP 2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0687 - - lja:Lj6g3v1916050.1 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0687 2 6959494 6967072 Mtr2g0687 2 6959494 6967072 ECH