Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0685 ATGCAACAACATCAACCATTAACCACTCATGAAGCTCCCAAGATTTCCCATCAGACTGAGACCGGGCTAAACAAAGAAATATCAGACAGTGGAGCTAACGGGAGGCGCCCAGATATTTCACTTCAAGTTCCACCTAGACCTTTAGGGTTTGGCAGCACTGCTGGTGGAAAGGTTCTGGACCACTCCCAAAGTTTCTCTAAAGGGTGGTCATCACCAAAAGGCTTTTTGCGGGTTTTGAGCTTCAAAAGAAAAGTGAATGTAGCAGCAGATGGTGAAAGAAGCAGCCTTCTTAATTCAGACCCTAAGACAGCTGCAGAGAGTACTAGTATGACCTCCATATCTGAAATTCCATGGTCAAGATGTAATTCTCTTCCAGTTTCCCATGCACCAAATCTATCCCCTTCAGTTGCTGCCACCCCCGTGTCTGCAAGGACATATAATGAACAACAGATTAAGCCACATAAAGATGTTAAATCTAAGGTTTCGAGGTCCCTTTCGATACCTGGACGAAATGTTGTTATTGTAAGATCTGTCTCTTTTAATACCCGCAGTGAACAGGACAAAGAAGATACAAATGACGATCAAATAACTCCTGCGCCAGTAGAAGTTACTGAAGATGAAGAAATTCCTGAAGAGGCAGCGGTGTGCAGGATATGTCTTGATGAGTGCGATGAAGGAAATACCTTTAAAATGGAATGCTATTGTAAAGGTGACCTGAGATTGGTGCATGAAGAATGTTTAATCAAATGGCTCAACACAAAAGGAACCAACAAATGTGAAATATGCGGGAAAGTGGTTCAGAATTTACCAGTAACCTTGCTCCGTGTATCCAGCTCTGTTCAACGAAGAAACAGACCGCTTCAGGATCACCAGAACTTTAATTCAGAGACAATAAGTGCCTGGCAAGATTTTGTGGTGCTTGTCCTGATAAGCACAATATGCTATTTTTTCTTCCTTGAACAGCTACTGCTTCCTGATTTGAAGACTCAAGCTATCATTATGTCAGCACCATTTTCCTTTACCTTGGGCCTCCTGGGGTCTGTTTTTGCTATCGTCCTTGCTATCAAAGAGTATATATGGACATATGCCGCTCTTGAGTTTGCACTTGTGGCTATAACTGTACATCTGTTTTATACTATGTTGCATTTGGCGCCAATTTATTCAATACTACTTTCAACAGTTTTTGGTTTTGGAATTGCTATGGGAATCAACTATATATATATCCAGTATGTTAATTGGAGACTTCAGGTCTCTATTAACGAGAACCCAGCATGA 1275 0.4157 MQQHQPLTTHEAPKISHQTETGLNKEISDSGANGRRPDISLQVPPRPLGFGSTAGGKVLDHSQSFSKGWSSPKGFLRVLSFKRKVNVAADGERSSLLNSDPKTAAESTSMTSISEIPWSRCNSLPVSHAPNLSPSVAATPVSARTYNEQQIKPHKDVKSKVSRSLSIPGRNVVIVRSVSFNTRSEQDKEDTNDDQITPAPVEVTEDEEIPEEAAVCRICLDECDEGNTFKMECYCKGDLRLVHEECLIKWLNTKGTNKCEICGKVVQNLPVTLLRVSSSVQRRNRPLQDHQNFNSETISAWQDFVVLVLISTICYFFFLEQLLLPDLKTQAIIMSAPFSFTLGLLGSVFAIVLAIKEYIWTYAALEFALVAITVHLFYTMLHLAPIYSILLSTVFGFGIAMGINYIYIQYVNWRLQVSINENPA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0685 424 Pfam RING-variant domain 216 262 IPR011016 GO:0008270
Mtr2g0685 424 PANTHER ZINC FINGER PROTEIN 1 424 - -
Mtr2g0685 424 PANTHER OS02G0165000 PROTEIN 1 424 - -
Mtr2g0685 424 SMART ringv_2 215 263 IPR011016 GO:0008270
Mtr2g0685 424 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 201 270 IPR013083 -
Mtr2g0685 424 SUPERFAMILY RING/U-box 212 266 - -
Mtr2g0685 424 MobiDBLite consensus disorder prediction 1 28 - -
Mtr2g0685 424 ProSiteProfiles Zinc finger RING-CH-type profile. 208 269 IPR011016 GO:0008270
Mtr2g0685 424 MobiDBLite consensus disorder prediction 1 55 - -
Mtr2g0685 424 CDD RING_CH-C4HC3_MARCH 216 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0685 Mtr-Chr2 6909640 6915647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0685 202 283 C3H Transcription Factor Family AT2G37950 32.143 2.20e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0685 - - gmx:100777100 628.632