Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0670 ATGGGTTGTGTGTTCGGTAAACAGTCATCAGTGGAAGAGAGGAGAGAGGAAGTGAGAGAAGTGAAAGTAGATGTGGGTGGTGGTGGTAGTGGTAGAGAGGTTGAGAATGTGAAAGAGGGTGGAGAGGAGAAGAGAGTAAGGCCTAGTGGGGAGAGAAGGAGAAGATCTTCGAAGGCGAATCCGAGGTTGAGTAATCCACCTAATAATGTTCATGGTGAACAGGTTGCAGCTGGTTGGCCTTCTTGGCTTTCTAAGGTTGCTGGTGAAGCTATTAATGGATTGGTTCCTAGGAGAGCTGATACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATACAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAGGTTGTAGCCTTAAAGAAGGTCCGTTTCGACAATTTAGAGCCTGAGAGTGTGAAGTTCATGGCCAGAGAGATTCTGATTCTGCGTCGTTTGGATCATCCCAATGTTGTCAAACTAGAAGGCTTAGTGACATCTAGAATGTCATGCAGTTTATATCTTGTGTTTGAATACATGGCACATGATCTGGCTGGACTTGCTACAAACCCTGCAATTAAGTTCACGGAGCCTCAGGTAAAATGTTACATGCATCAGCTATTTTCTGGGCTGGAACATTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGTTCAAACCTTCTTATTGATAATGATGGAGTTCTCAAGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCCGATCACAAGCACCCTATGACCAGTAGAGTCGTGACTTTATGGTATCGACCTCCAGAACTTCTTCTTGGAGCCACTGAATATGGTGTAGGCGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTGTTGGCTGGAAAACCCATCATGCCTGGTCGAACAGAGGTGGAACAGCTACATAAGATATTTAAGCTATGCGGTTCTCCTTCTGAAGACTATTGGAAAAAGTCAAAGTTGCCGCATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGATGCATAGCGGAGACTTTTAAGAATTTTCCGCCATCATCCCTGCCATTGATCGAGACCCTTCTTGCAATCGATCCAGATGAACGTCTGACTGCCACTGCTGCACTGCATAGTGAATTCTTTACTACTAAACCATATGCCTGTGATCCCTCCAGCCTTCCTAAATATCCTCCCAGCAAGGAGATGGATGCGAAGCTACGGGATGAAGAAGCCAGAAGATTGAGAGCAGCTGGTAGATCAAATGCTGATGGTGTCAAGAAATCACGTCCACGTGAGCGAGTAAGGAGGGGACTTCCCGTTCCAGATGCCAATGCTGAACTGCAAGCAAATATTGATAGACGGCGATTGATCACACACGCAAATGCTAAGAGCAAGAGTGAGAAATTTCCTCCTCCCCACCAAGACGGAGATCTAGGCTATCCTTTGGGTTCTTCACAACACATGGATCCAGTTTTCGATGCTTCCGATGTTCCATTCAGTTCCACAAACTTGTCACTACCCAAAGCAGATATCCATACTTGGTCTGGTCCATTGGTAGATCCTGGCAGCATTGGTGCACCGAGGAGAAAGAAGAAACACGGCAGGTGA 1623 0.4572 MGCVFGKQSSVEERREEVREVKVDVGGGGSGREVENVKEGGEEKRVRPSGERRRRSSKANPRLSNPPNNVHGEQVAAGWPSWLSKVAGEAINGLVPRRADTFEKLDKIGQGTYSNVYKARDTLTGKVVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGVLKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWKKSKLPHATIFKPQQSYKRCIAETFKNFPPSSLPLIETLLAIDPDERLTATAALHSEFFTTKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRPRERVRRGLPVPDANAELQANIDRRRLITHANAKSKSEKFPPPHQDGDLGYPLGSSQHMDPVFDASDVPFSSTNLSLPKADIHTWSGPLVDPGSIGAPRRKKKHGR* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0670 540 PANTHER CYCLIN-DEPENDENT KINASE 1 539 - -
Mtr2g0670 540 ProSitePatterns Protein kinases ATP-binding region signature. 108 131 IPR017441 GO:0005524
Mtr2g0670 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Mtr2g0670 540 Pfam Protein kinase domain 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0670 540 SMART serkin_6 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0670 540 Gene3D Phosphorylase Kinase; domain 1 90 184 - -
Mtr2g0670 540 MobiDBLite consensus disorder prediction 419 444 - -
Mtr2g0670 540 CDD STKc_CDK9_like 102 386 - -
Mtr2g0670 540 MobiDBLite consensus disorder prediction 35 58 - -
Mtr2g0670 540 SUPERFAMILY Protein kinase-like (PK-like) 97 392 IPR011009 -
Mtr2g0670 540 ProSiteProfiles Protein kinase domain profile. 102 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0670 540 MobiDBLite consensus disorder prediction 453 477 - -
Mtr2g0670 540 MobiDBLite consensus disorder prediction 419 540 - -
Mtr2g0670 540 MobiDBLite consensus disorder prediction 9 23 - -
Mtr2g0670 540 MobiDBLite consensus disorder prediction 1 74 - -
Mtr2g0670 540 Gene3D Transferase(Phosphotransferase) domain 1 185 425 - -
Mtr2g0670 540 PANTHER CELL DIVISION PROTEIN KINASE 1 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0670 Mtr-Chr2 6772640 6777500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0670 97 424 Core Cell Cycle Gene Families AT5G10270 51.744 1.66e-118 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mtr2g0670 Pkinase 3.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0670 K08819 - gmx:100779413 951.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0670 2 6772640 6777500 Mtr2g0670 2 6772640 6777500 ECH
Mtr4g4329 4 57352639 57356266 Mtr2g0670 2 6772640 6777500 PCT