Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0656 ATGTTTTGTTACTATCGGAGAACATTGCTCTTCCCTAATAACCTCAAATTCAGATTCAAAACACTAACAGTAACACAATCTTCATTTCTTCTCCAACCCTTTTCTTCATCTACCAAACAACAACAACACTCTTTCACAGTTAACTATCTCATTCAAAATCTTGGTTTCTCCCCACAAACAGCTTCCAAACTCTCCAAACGACTTCAACTCAACAACTCACAAAAACCAGACTCAGTCCTCTTATTATTCAAATCCTATGGCTTCTCAAACTCCCAGTTATCAACTCTCATCAAAACCTACCCTAATCTTCTCTCTGTTAATCCCAACAAGACCATTCTTCCTAAATTCAACTTCCTTCTCTCAAAGGGTGCTTCAAATTCAGACCTTGTCTACATCATCTCCAAAAATCCTTTTATATTGTGTCGAAGCTTGGAAAATACAATAACCCCTTGTTATCATTTTATCAAAAGATTCTTACTTTCTGATCAATCTATCATCGCTTCTCTCAAACATTGCGCTTGCTTGCTTTATTCTAAAATCCCATCTCACAATATTCAATTCCTGCTTCAAAATGGGGTACCTGAGTCTAAAGTTTGTATTTTTTTTCGAAATTGGTATTCTATATTTGCTGAGAACCCTCCAAGATTTGAGAAGGCGGTGGTGGAAGTAAAGGAATTAGGATTTAAACCCGAAACAACGTTTTTCATTGTTGCATTGCGTGCTAAGATTAATAGAAAATTCCTTTGGGAAAGGAAGATTGATGTCTATAAGAAATGGGGTTGGTCTGAAGAAAGTTTTGTCTCGGCATTTTTGAAGTATCCATGGTGTATGTTGGCATCTGTTAATAAAATTGAGGCAACAATGAATTTTTTTGTTGATCACATGGGTTGGAACCCTATTGTGCTTGCAAAACACCCAATACTTCTTTTGTTGAGTCTTGAGAAAAGGGTTATTCCTAGAGCTTTTGTCTTGAAATTTCTTGAATCCAAAGGTTTGATTAAGGATGCTAAATTGGCTGCAGCTTTCAAAGTTTCTGAGGATGTGTTTTTGAAGAGATTTGTGACTTGCTACGAGGAAGAAGCTTCTCAACTGTTGAAGTTGTATGAAGAGAAAAAAGATGTTTCCAATAGGATGTTGAAAAAAGATTTTAAGCCGTGA 1158 0.361 MFCYYRRTLLFPNNLKFRFKTLTVTQSSFLLQPFSSSTKQQQHSFTVNYLIQNLGFSPQTASKLSKRLQLNNSQKPDSVLLLFKSYGFSNSQLSTLIKTYPNLLSVNPNKTILPKFNFLLSKGASNSDLVYIISKNPFILCRSLENTITPCYHFIKRFLLSDQSIIASLKHCACLLYSKIPSHNIQFLLQNGVPESKVCIFFRNWYSIFAENPPRFEKAVVEVKELGFKPETTFFIVALRAKINRKFLWERKIDVYKKWGWSEESFVSAFLKYPWCMLASVNKIEATMNFFVDHMGWNPIVLAKHPILLLLSLEKRVIPRAFVLKFLESKGLIKDAKLAAAFKVSEDVFLKRFVTCYEEEASQLLKLYEEKKDVSNRMLKKDFKP* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0656 385 Gene3D Transcription termination factor 3, mitochondrial 40 181 IPR038538 -
Mtr2g0656 385 Gene3D Transcription termination factor 3, mitochondrial 182 367 IPR038538 -
Mtr2g0656 385 PANTHER CGI-12 PROTEIN-RELATED 39 371 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 PANTHER OS04G0637500 PROTEIN 39 371 - -
Mtr2g0656 385 Pfam mTERF 183 349 IPR003690 GO:0003690|GO:0006355
Mtr2g0656 385 Pfam mTERF 82 232 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0656 Mtr-Chr2 6615043 6616804 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr2g0656 mTERF 1.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0656 K15032 - gmx:102663105 420.239