Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0651 ATGGACCACTTTCCTCGCTCCACTCAACCTGATCCGTCTTCTCAATGGACCGGACCGGATTCTCAAACCGGTTTAGAAGAACCTATGTGGCAATTGGGGTTAGGTAGTGGTGGTAGTGGTGAAGATTCCTATCCACAACGACCTGATGAGGTTGATTGTACTTACTATTTGAGAACTGGTTTTTGTGGCTTTGGTTCTAGGTGTCGGTTCAATCATCCCCGTGACCGTGCCGCGGTTATTGGAGCTGCTTCTAGGACTGTTGGGGAGTATCCTGAACGTGTTGGACAGCCTGTGTGCCAGTATTATATGAGGACAAGATCTTGCAAATTTGGTGCGTCTTGCAAGTATCATCACCCAAAACAGACAGGAGCCACTGATGCTAGCCCTGTTTCACTTAATTATTATGGATATCCGTTACGTCCGGGTGAAAAGGAATGTTCATATTTTGTGAAAACAGGACAATGCAAGTTTGGTGCAACTTGTAAATTTGATCATCCAGTTCCTGCTAGTGTACAAATTCCAGCTCCATCGCCGGTTCCTCCGGTTTCATCTTTACATGTACCAGTACCTTCCCCATTGTATCCAACCGTACAGACCCCATCTGGACCTTCTTCACAACAAATTGGGGTACTGGTCGCAAGGCCACCTCTACTACATGGTTCGTTTGTCCAAAGCCCCTATGGACCTATGGTATTGTCCCCAACCATGGTTCCTTTTTCTGGCTGGGGTCCTTATCAGGCGACTGCAACAAGCCCTGTACTTCCTTCTGGTTCTCCAGCTAATGTTGGTTCCACGCAGCTATATGGGATAACCCAGCTACCTTCACCGGGTAATGCCTATACTGGACCTTATCAACTTTCTGGTTCCTCAGTCGGTCCTTCAAGCAGAAATCAGAACGAGCAATCATTTCCAGCAAGTCCTAATCAACCAGAGTATCATTATTACTCCAAACCAGAGGAGCTTCCTTTTGCTCCATCTTATAGGTATCACAAACCACCAGACATGAGTGCTCCAAAAGTGAATGCCGTCCTTAGCCCTGCAGGTCTTCCGTTACGTCCGGGGGCAGCACTTTGCACTCATTACGCACAGCGTGGTATATGCAAGTTTGGTCCTGCATGCAAATTTGATCATCCCATTGCACCACTGAGTTACAGTCCATCTGCCTCTTCCCTGACAGACGTACCAGTTGCACCCTACTTTGTGGGTTCATCCATTGGTACTCTTGTTCCTTCATCTTCTTCACCAGAGTTGCAGCCAGAACTTACTGCAGGATCCAGCAGGGAGTCTGTTCCTTCCAGAATATCGTCATCAGTAAGCACATCAACTGGATCAGTTGGCTTGACTTTGCCAACTGGTGGCCCTGTTTCTCAATCAAGCACTCGAAGTTCTAGTCCTTTAGCACCTGCCAATACCACGACAAGTAGCAATGTTTCTCACCCCTCAAATTAA 1449 0.4734 MDHFPRSTQPDPSSQWTGPDSQTGLEEPMWQLGLGSGGSGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYPTVQTPSGPSSQQIGVLVARPPLLHGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLPSGSPANVGSTQLYGITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYHYYSKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKFDHPIAPLSYSPSASSLTDVPVAPYFVGSSIGTLVPSSSSPELQPELTAGSSRESVPSRISSSVSTSTGSVGLTLPTGGPVSQSSTRSSSPLAPANTTTSSNVSHPSN* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0651 482 Gene3D - 45 128 - -
Mtr2g0651 482 Gene3D - 353 406 - -
Mtr2g0651 482 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
Mtr2g0651 482 MobiDBLite consensus disorder prediction 279 311 - -
Mtr2g0651 482 SMART c3hfinal6 47 74 IPR000571 GO:0046872
Mtr2g0651 482 SMART c3hfinal6 140 167 IPR000571 GO:0046872
Mtr2g0651 482 SMART c3hfinal6 352 379 IPR000571 GO:0046872
Mtr2g0651 482 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Mtr2g0651 482 SUPERFAMILY CCCH zinc finger 49 76 IPR036855 GO:0046872
Mtr2g0651 482 PANTHER TRANSCRIPTION FACTOR C3H FAMILY-RELATED 1 472 - -
Mtr2g0651 482 PANTHER PROTEIN PHOSPHATASE RELATED 1 472 - -
Mtr2g0651 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 142 166 IPR000571 GO:0046872
Mtr2g0651 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Mtr2g0651 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 49 74 IPR000571 GO:0046872
Mtr2g0651 482 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 355 378 IPR000571 GO:0046872
Mtr2g0651 482 SUPERFAMILY CCCH zinc finger 355 381 IPR036855 GO:0046872
Mtr2g0651 482 MobiDBLite consensus disorder prediction 1 46 - -
Mtr2g0651 482 ProSiteProfiles Zinc finger C3H1-type profile. 140 168 IPR000571 GO:0046872
Mtr2g0651 482 ProSiteProfiles Zinc finger C3H1-type profile. 352 380 IPR000571 GO:0046872
Mtr2g0651 482 Gene3D - 129 175 - -
Mtr2g0651 482 SUPERFAMILY CCCH zinc finger 96 120 IPR036855 GO:0046872
Mtr2g0651 482 MobiDBLite consensus disorder prediction 409 482 - -
Mtr2g0651 482 ProSiteProfiles Zinc finger C3H1-type profile. 47 75 IPR000571 GO:0046872
Mtr2g0651 482 MobiDBLite consensus disorder prediction 279 309 - -
Mtr2g0651 482 SUPERFAMILY CCCH zinc finger 142 168 IPR036855 GO:0046872
Mtr2g0651 482 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0651 Mtr-Chr2 6573225 6579152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0651 11 448 C2H2 Transcription Factor Family AT5G18550 53.933 1.57e-139 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mtr2g0651 zf-CCCH 8.7e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0651 - - gmx:100812433 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0651 2 6573225 6579152 Mtr2g0651 2 6573225 6579152 ECH
Mtr4g4350 4 57530058 57534330 Mtr2g0651 2 6573225 6579152 PCT