Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0645 ATGTCATTTTCCGGTCTCAAAAACTTCTTCCAGAGGTTCTGGTTGGACGAAATGGAAATGGGAAGTTATACACATAGCAGCTTTTTGTCTAGTGATCTTCTACCATCTCTTGGCGCCCGAACAAACCAGGAAACTAGACTACGAAAATACATAATCTCCCCATTCAATCCTCAGTATAGGCTTTGGGAGTTGTTACTGATTGTTCTAGTCATATACTCAGCTTGGATATGCCCCTTTGAGTTTGCCTTTCTGACGTATAAGCAAAATGGACTATTCATCATAGACAACATTGTCAATGGCTTCTTCGCCATCGACATCGTGCTTACATTCTTCGTTGCATACCACGATAGTCATTCTTCTCTTCTCATTGATGATCCAAAGAAAATTGCAACCAGTTACATGTCCACCTGGTTTGTTTTGGATATCTGCTCAACAGCACCACTTGAGCCCATTAGTCTCCTCTTCACTACTTATGACAGTGAGCTTGGTTTCAAACTTCTTAACATGTTGCGATTATGGCGCCTGAGACGAGTCAGTTCTCTGTTTGCAAGACTCGAAAAGGACATTCGCTTCAATTACTTCTGGGTTAGGTGTACAAAGCTCACTGCTGTAACCTTGTTTGCAGTGCACTGTGCAGGATGCTTTAACTATCTAATTGCAGATATGTACCCTGATTCCAAAAGAACTTGGATAGGTGCTATGTACCCAAATTTTAAAGAACAAAGCCTTTGGGACAGATACGTAACTTCAATATACTGGTCTATCGTCACGCTTACTACCACTGGCTATGGAGATTTACATGCAGAGAACACCATAGAGATGTTGTTTGATATCACTTACATGCTATTCAACTTGGGTTTAACAGCATACATCATTGGAAACATGACTAACCTTGTAGTTCACTGGACCAGCCGCACCCAAAATTTTAGGGATACAGTCAAAGCAGCTTCTGAGTTTGCTTCAAGAAATCATCTGCCACGTCGCGTACACAATCAAATGTTGGCACACATTTGTTTGAGGTTTAAAACAGAAGGACTGAAGCAGCAAGAAGCATTAAATGATCTTCCAAAGGCGATTCGGTCAAGCATCGCACACCATCTCTTTTTTCCTGTTGTGCAGAAGGTCTACCTCTTCCAAGGAGTCTCCAATGACTTCCTTTTCCAACTGGTTTCAGAAATGGAAGCTGAGTATTTCCCACCAAAAGAAGATGTGATACTGCAAAATGAATCTCCTACAGACCTTTATGTACTGGTTTCAGGCGCAGTGAATCTCGTTCACTGCATCGATGGGAATGATCAAGTGGTTTTTGACAAAGCAACAGCAGTAGAAGCATTTGGAGAGATTGGAGTTTTATATCATGTACCACAGCCTTTCACAGTTCGAACCACGGAGCTTTCTCAGATTTTAAGAATCAACAGAACATCCCTAATGAATGTTTTACAGGCAAATCCAGGAGATGCACAGATTGTGATGAATAACCTTTTAATGAGATTAAAGGAGCGTGAAGGATTTGACTCTGAATATCCACACACAGATCATGGATTGGTTCTATATAAATTGCTAGGTAACACAAAAGAAAGCTCTTCTCAAGAGTCTACAAATAATTTACATGGCCATTCCTTAATGCATGAAGGAGAGAACATAAATATCAGAGACTCACAGAATAATTTGCATATTGTGACTAATGATGTTTCAGTCCCTAATAACATGATACCTGAGGATGGCAAAAGAGATCTCCATGCCGCTGTGCTGCCTGTACATAAGGGGAAACTAGACATTGTTGAAATTCTGATTGAAAGAGATGCAAAATCAAAGAACCCAAATACCATAGGGTGGACACAAAAAGCTTTAGTACAACAGCTAAAAAACAAAAGCATTTCTGACCATACAATGTATTATGAAAGCGAGAAGAAATCAGACGAACATAGAATAGAGATTGTTGAGCCACAAATCCTTAACTTTGGCAAGAATGGCTCAACCAGAAACAGTAGACAGGATGGTATTAGAACTATCAACTTCCCATTAGAGAAAGTGTACACAGACACCAATTCAAGAAATTCCAATAGTCCAAGTGACAGAGAAATGGCAAGGTTCATCAAGAAGAGGGTAACAATCCATTCGCCAAGTGGATGGAGAAGTAGCTCACATGGACAACAAGGAAAACTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCAAAATTGCTGGTGAAAAATTTGGCGGCTTCAACGCCACAAAAGTAATTAATAAAGAGAATGCAGAGATAGACGACATTGATGTCATTAGAGATGGTGATCATCTCTTTCTTCTTGGCAGTGATAGTGACAATTTGAACTCATGA 2343 0.4003 MSFSGLKNFFQRFWLDEMEMGSYTHSSFLSSDLLPSLGARTNQETRLRKYIISPFNPQYRLWELLLIVLVIYSAWICPFEFAFLTYKQNGLFIIDNIVNGFFAIDIVLTFFVAYHDSHSSLLIDDPKKIATSYMSTWFVLDICSTAPLEPISLLFTTYDSELGFKLLNMLRLWRLRRVSSLFARLEKDIRFNYFWVRCTKLTAVTLFAVHCAGCFNYLIADMYPDSKRTWIGAMYPNFKEQSLWDRYVTSIYWSIVTLTTTGYGDLHAENTIEMLFDITYMLFNLGLTAYIIGNMTNLVVHWTSRTQNFRDTVKAASEFASRNHLPRRVHNQMLAHICLRFKTEGLKQQEALNDLPKAIRSSIAHHLFFPVVQKVYLFQGVSNDFLFQLVSEMEAEYFPPKEDVILQNESPTDLYVLVSGAVNLVHCIDGNDQVVFDKATAVEAFGEIGVLYHVPQPFTVRTTELSQILRINRTSLMNVLQANPGDAQIVMNNLLMRLKEREGFDSEYPHTDHGLVLYKLLGNTKESSSQESTNNLHGHSLMHEGENINIRDSQNNLHIVTNDVSVPNNMIPEDGKRDLHAAVLPVHKGKLDIVEILIERDAKSKNPNTIGWTQKALVQQLKNKSISDHTMYYESEKKSDEHRIEIVEPQILNFGKNGSTRNSRQDGIRTINFPLEKVYTDTNSRNSNSPSDREMARFIKKRVTIHSPSGWRSSSHGQQGKLIILPDSLEELLKIAGEKFGGFNATKVINKENAEIDDIDVIRDGDHLFLLGSDSDNLNS* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0645 780 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Mtr2g0645 780 Gene3D - 60 300 - -
Mtr2g0645 780 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g0645 780 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g0645 780 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g0645 780 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g0645 780 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mtr2g0645 780 PANTHER POTASSIUM CHANNEL AKT1 1 780 IPR045319 GO:0005249|GO:0006813
Mtr2g0645 780 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 1 780 - -
Mtr2g0645 780 Pfam Ion transport protein 60 307 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mtr2g0645 780 SUPERFAMILY cAMP-binding domain-like 304 498 IPR018490 -
Mtr2g0645 780 SMART cnmp_10 377 495 IPR000595 -
Mtr2g0645 780 ProSiteProfiles KHA domain profile. 702 780 IPR021789 -
Mtr2g0645 780 Pfam KHA, dimerisation domain of potassium ion channel 701 770 IPR021789 -
Mtr2g0645 780 CDD CAP_ED 377 491 IPR000595 -
Mtr2g0645 780 Gene3D Helix hairpin bin 301 367 - -
Mtr2g0645 780 Pfam Cyclic nucleotide-binding domain 397 482 IPR000595 -
Mtr2g0645 780 ProSiteProfiles cAMP/cGMP binding motif profile. 377 497 IPR000595 -
Mtr2g0645 780 Gene3D Jelly Rolls 370 503 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0645 Mtr-Chr2 6457981 6462567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0645 690 770 Ion Channels AT5G46240 55.556 4.48e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0645 K21867 - gmx:100811356 1146.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0645 2 6457981 6462567 Mtr2g0645 2 6457981 6462567 ECH