Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0623 ATGAGGAGGAATTGCAACTTGGAACTATGCCTTTTTCCTCCATACAATTCTAGCAATCACCAAAACCACCCCATGGTAGAAGAAGAAGAAGAAGAAGATAGTAATGAGAGCACTCCAATGCAAAATCAGCATCAGCCACTGACCATTTTCTACGATGGCAAGATGTGTGTTACTGATGTCACAGAGCTTCAGGCCAAATCCATCTTAATGCTGGCAAATAGAATTAAGGTGCAAGAAAAAGTGATGACACCAATAGGGTCAGAACCATCAACACCAACCACCATAGTGCAATCTCCTCATCAATTGTATAGCCCTGGACCAGGACTTTCCATGAAAAGATCTTTGCAAAGGTTTCTACAGAAGAGAAAGAATAGGGTCCAAGAAGCATCTCCATATTATCACTAG 405 0.4148 MRRNCNLELCLFPPYNSSNHQNHPMVEEEEEEDSNESTPMQNQHQPLTIFYDGKMCVTDVTELQAKSILMLANRIKVQEKVMTPIGSEPSTPTTIVQSPHQLYSPGPGLSMKRSLQRFLQKRKNRVQEASPYYH* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0623 134 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 134 IPR040390 -
Mtr2g0623 134 PANTHER - 1 134 - -
Mtr2g0623 134 MobiDBLite consensus disorder prediction 83 109 - -
Mtr2g0623 134 MobiDBLite consensus disorder prediction 18 42 - -
Mtr2g0623 134 SMART tify_2 40 74 IPR010399 -
Mtr2g0623 134 MobiDBLite consensus disorder prediction 84 104 - -
Mtr2g0623 134 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Mtr2g0623 134 Pfam tify domain 43 73 IPR010399 -
Mtr2g0623 134 Pfam Jas motif 112 133 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0623 Mtr-Chr2 6273242 6276158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0623 1 133 Tify Gene Family AT1G30135 42.647 1.82e-24 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mtr2g0623 tify 1.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0623 - - gmx:100803886 172.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0623 2 6273242 6276158 Mtr2g0623 2 6273242 6276158 ECH