Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0595 ATGAGACTCTCTTCAGCTAGTTTTAGTCCTCCACCCCAAGAAGGGGAAAAGAGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTCTCTTTGCCAGCAGTTGGAAGTAGAGTTGTGTACTTTCCACAAGGCCACAGTGAACAAGTGGCTGTGTCAACTAACAAGGAAGTCGATGCACATATCCCAAACTATCCAAGCTTACCTCCTCAGCTTATTTGTCAACTTCATAATTTGACTATGCATGCTGATGTGGAGACCGATGAAGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGTTGGGAACTCCAAGTAAACAGCCGACAAACTACTTTTGCAAGACCTTGACTGCTAGTGACACAAGCACTCACGGGGGATTCTCTGTTCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCTTTGGATTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATAGCAAGGGACTTGCATGGTAACGAATGGAAATTCAGACATATCTTCCGAGGCCAGCCCAAAAGACATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGTTTATCTGGAATGAAAAGAACCAATTGCTTCTTGGTATTCGCCGTGCTAGCCGACCACAAACTGTGATGCCTTCCTCAGTATTGTCAAGTGATAGTATGCACTTGGGACTTCTTGCTGCAGCAGCTCATGCGGCTGCAACCAATAGCCGTTTCACTATTTTCTATAACCCACGTGCGTGTCCATCCGAATTTGTCATACCCTTGGCGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGTTTCAGGATGCTCTTTGAAACAGAGGAGTCTAGTGTGCGACGATACATGGGTACAATAACTGGCATTTGTGACCTAGATTCTGTCCGGTGGCCTAACTCACATTGGCGCTCGGTAAAGGTTGGTTGGGATGAATCCACTGCCGGAGAAAGGCAACCTAGAGTGTCTTTGTGGGAAATCGAGCCATTAACAACGTTTCCTATGTATCCGTCACCATTCCCTCTTAGGCTTAAACGACCATGGCCTCCTGGATTGCCTTCGTTCCATGGCATGAAAGATGATGATTTTGGCATGAGTTCTCCTTTGATGTGGCTCCGAGACACGGATAGAGGGCTTCAATCTCTTAATTATCAAGGGATTGGGGTTAATCCTTGGATGCAGCCAAGGTTTGATCCCGCCATGCTGAATATGCAAACCGATATGTATCAAGCTGTGGCTGCTGCTGCACTTCAGGACATGAGGACTGTAGTAGATCCTTCCAAACAGCTTCCTGGTTCCTTGCTTCAATTTCAGCAACCACCGAACTTCCCGAACAGGACCGCTGCTTTAATGCAGGCTCAGATGTTGCAACAGTCGCAACCTCAACAGGCTTTTCAAAATAATAATCAGGAGAATCAAAATCTGTCGCAATCTCAGCCACAAGCTCAGACTAATCCTCAACAGCATCCACAGCATCAGCATTCATTCAATAATCAACTCCATCATCATAGCCAGCAGCAACAACAAACTCAACAGCAAGTGGTGGATAATAATCAGCAGATTTCTGGTTCGGTCTCTACAATGTCTCAGTTTGTTTCAGCGACTCAACCTCAATCACCACCACCCATGCAAGCTCTCTCTTCTCTATGCCATCAGCAGAGTTTTTCTGATTCAAATGTGAACTCTTCAACTACTATTGTTTCTCCTTTGCACAGTATCATGGGTTCATCGTTTCCGCATGATGAATCATCCCTCCTTATGAGTCTTCCAAGAACAAGCTCTTGGGTTCCTGTTCAAAATTCAACTGGTTGGCCATCCAAACGCATTGCAGTGGATCCACTCCTCTCTTCGGGAGCATCTCAATGTATTCTGCCTCAGGTGGAGCAGCTAGGGCAGGCACGGAATTCGATGTCTCAAAATGCTATTACATTGCCACCATTTCCTGGTAGGGAGTGCTCAATAGACCAAGAAGGGAGCAATGATCCGCAAAGTAATCTTTTATTCGGTGTCAATATAGATCCCTCATCTCTTCTACTGCATAATGGGATGTCGAACTTTAAGGGGATCAGTGGCAACAACAATGATTCCTCAACCATGTCCTACCATCAATCTTCTAGTTACATGAACACCGCAGGCGCTGATTCTTCGTTGAATCATGGAGTAACGCCTAGTATTGGTGAATCTGGTTTCTTGCATACCCAGGAAAACGGGGAGCAAGGAAACAACCCACTGAACAAGACCTTTGTGAAGGTTTATAAATCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAGCTCGCCCGAATGTTCGGACTGGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTTGTGAATAGTGTATGGTGCATCAAGATACTTTCGCCTGAGGAAGTGCAGCAAATGGGCAACACTGGCCTCGGGCTTTTGAACTCGGTTCCAATTCAAAGGCTCTCAAATAGCATTTGTGATGACTATGTGAGCCGTCAAGATTCAAGAAATCTAAGCAGCGGGATAACAACCGTGGGATCTCTAGACTACTAA 2727 0.4613 MRLSSASFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMSSPLMWLRDTDRGLQSLNYQGIGVNPWMQPRFDPAMLNMQTDMYQAVAAAALQDMRTVVDPSKQLPGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNQENQNLSQSQPQAQTNPQQHPQHQHSFNNQLHHHSQQQQQTQQQVVDNNQQISGSVSTMSQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSLLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQARNSMSQNAITLPPFPGRECSIDQEGSNDPQSNLLFGVNIDPSSLLLHNGMSNFKGISGNNNDSSTMSYHQSSSYMNTAGADSSLNHGVTPSIGESGFLHTQENGEQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQDSRNLSSGITTVGSLDY* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0595 908 SUPERFAMILY CAD & PB1 domains 774 850 - -
Mtr2g0595 908 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Mtr2g0595 908 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Mtr2g0595 908 Gene3D - 125 228 IPR015300 -
Mtr2g0595 908 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 888 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mtr2g0595 908 SMART B3_2 127 229 IPR003340 GO:0003677
Mtr2g0595 908 Gene3D - 291 363 - -
Mtr2g0595 908 ProSiteProfiles PB1 domain profile. 775 859 IPR000270 GO:0005515
Mtr2g0595 908 PANTHER AUXIN RESPONSE FACTOR 1 888 - -
Mtr2g0595 908 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mtr2g0595 908 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Mtr2g0595 908 CDD B3_DNA 126 227 IPR003340 GO:0003677
Mtr2g0595 908 Gene3D - 772 864 - -
Mtr2g0595 908 Pfam AUX/IAA family 764 860 IPR033389 -
Mtr2g0595 908 MobiDBLite consensus disorder prediction 498 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0595 Mtr-Chr2 5961845 5968004 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0595 1 484 B3 DNA Binding Superfamily AT1G30330 87.117 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mtr2g0595 B3 2e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0595 - - gmx:100796447 1472.6