Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0585 ATGCTTTTCAATTTTGCTGATCATCTTGATGTAACGTTGATGATCATTGGCACTATCTCTGCTGTGGCTAATGGATTGGCAAGCCCTCTCATGACTCTCTTTCTTGGGAATGTCATCAATGCATTTGGTTCCTCTAATCCAGCAGACGCTATCAAACAAGTTTCTAAGGTATCATTGCTATTTGTTTACCTAGCTATTGGGTCTGGAATAGCATCATTTCTACAGGTAACATGTTGGATGGTAACAGGAGAAAGACAAGCTGCAAGGATTCGTAGCTTGTACTTGAAAACCATATTACAACAGGATATTGCATTCTTTGATACTGAAACAAACACAGGAGAGGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGAGGCTATGGGAGAAAAGGTTGGGAAGTTTTTTCAACTTGCTTCAAATTTTTGTGGTGGCTTTGTGATGGCATTTATAAAAGGATGGCGCCTAGCTATAGTTTTACTCGCATGTGTACCTTGTGTTGCCGTTGCTGGTGCTTTCATGTCTATAGTGATGGCTAAAATGTCAAGTCGCGGACAAATTGCTTATGCAGAAGCGGGAAACGTTGTTGATCAAACAGTTGGAGCCATCAGAACAGTTGCATCTTTTACTGGTGAGAAAAAAGCCATAGAGAAGTATAATAGCAAGATAAAAATTGCTTATACTACAATGGTTAAACAAGGCATAGTCTCAGGGTTTGGAATCGGAATGCTTACCTTTATTGCCTTCTGCACTTATGGACTTGCCATGTGGTATGGTTCCAAACTAGTCATCGAGAAAGGATATAATGGCGGAACGGTCATGACTGTGATCATAGCTCTTATGACTGGTGGGATAGCATTAGGTCAAACATCCCCAAGCTTACAAGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTTGAGACAATTAGAAGAAAGCCCATCATTGATGCAAGTGACACCAGTGGTGCTGTCTTGGAAGACATAAAGGGAGATATTGAACTCAGAGATGTTTCCTTCAGATACCCTGCAAGGCCTGATGTGCAGATCTTTGATGGTTTCTCATTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCTACTGTAATCAGTTTATTGGAAAGATTCTATGATCCTGACGCTGGCGAAGTACTTATAGATGGTGTGAATTTGAAGAACTTGCAACTTAGATGGATAAGAGAACAGATTGGGCTGGTTAGTCAGGAACCTATCTTGTTTACTACTTCTATCAGAGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAAGAGATAACAACAGCTATAACACTAGCAAATGCCAAGAAATTCATTGACAAACTTCCTCAGGGCCTTGACACCATGGCAGGGCAAAATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCAATATTGAAGAACCCAAAAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCGGAGTCTGAACGTATTGTTCAAGAAGCACTAGAAAAAATTATATTGAAAAGGACTACTGTTGTCGTTGCGCATCGTTTGACAACTATCAGAAATGCTGACATAATAGCAGTGGTTCAACAGGGGAAAATTGTGGAGAGAGGAACACACAGCGGGTTAACCATGGATCCTGACGGTGCTTATTCTCAACTTATTCGTCTACAAGAAGGAGACAATGAAGCTGAGGGTAGCAGAAAGTCTGAAGCAGATAAGTTAGGTGACAATTTAAATATAGATAGTCACATGGCTGGATCTTCGACTCAGAGAACTTCCTTTGTGAGATCAATAAGCCAAACTTCATCAGTGAGTCATCGACATTCCCAATCACTTAGAGGCTTGTCTGGAGAAATAGTAGAATCAGATATCGAACAAGGTCAACTCGATAACAAGAAAAAACCCAAAGTATCTATATGGCGTTTGGCCAAGTTGAACAAGCCAGAGATTCCTGTCATACTGCTTGGAGCCATTGCTGCAATAGTAAATGGTGTTGTGTTCCCTATATTTGGCTTCTTGTTTTCAGCAGTCATTAGTATGTTTTATAAACCTCCAGAACAGCAGAGGAAAGAGTCCAGGTTCTGGTCCCTTCTATTCGTGGGTTTGGGTTTGGTTACTTTAGTGATTTTACCACTGCAAAATTTCTTCTTTGGAATTGCGGGAGGAAAACTTATTGAAAGAATTCGTTCATTGACATTTGAAAAGATTGTGCACCAAGAAATTAGTTGGTTTGATGATCCTTCACATTCAAGTGGTGCAGTTGGTGCAAGGTTATCAATCGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACCATGGCCCTCATTGTTCAGAACATATCAACGGTCATAGCTGGTCTAGTTATAGCATTCACTGCTAACTGGATTCTCGCTTTTATAGTTTTGGTTTTGACACCTATGATTCTTATGCAAGGAATCGTTCAGATGAAGTTTCTTAAAGGATTCAGTGCCGATGCTAAGGTTATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCCGTTAGTAGCATCAGAACTGTTGCATCATTTTGTGCAGAATCAAAGGTGATGGACATGTACAGTAAAAAATGTTTAGGCCCAGCGAAACAAGGAGTTCGCTTGGGGCTTGTTAGTGGTATAGGATTTGGCTGCTCGTTTTTAGTTCTATATTGCACAAATGCTTTCATTTTTTACATAGGATCTGTTCTAGTGCAACACGGCAAAGCAACTTTTACAGAAGTTTTCAGGGTTTTCTTTGCTTTAACAATGACGGCAATCGCCGTTTCGCAGACGACTACATTGGCACCAGACACTAACAAGGCCAAAGATTCTGCAGCTTCAATATTTGAAATTATTGACAGCAAACCTGATATTGATTCCAGCAGCAATGCGGGTGTAACACGAGAAACAGTAGTTGGTGATATTGAACTTCAACATGTCAACTTTAATTACCCAACAAGGCCCGACATTCAAATTTTCAAAGATTTAAGCCTAAGCATCCCATCTGCAAAGACTATTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTTATCAGCCTCTTAGAGAGATTTTATGACCCTAATTCTGGACGTATATTACTAGATGGAGTGGATCTCAAAACTTTCAGATTAAGCTGGTTGAGACAACAAATGGGGTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCTAACATAGGTTATGGAAAAGAAGGGGGTGCTACAGAGGATGAGATCATTGCAGCAGCTAACGCAGCAAATGCACACAGCTTCATAAGTAATCTTCCAGATGGATATGACACGTCTGTTGGAGAAAGAGGCACGCAACTGTCCGGAGGACAGAAGCAGCGCATTGCTATTGCAAGAACCATGCTAAAAAACCCCAAAATACTTTTGCTTGATGAGGCGACAAGTGCACTTGATGCTGAGTCAGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAGAACTACTGTGGTGGTAGCTCACCGTCTTACAACAATTCGAGGGGCTGATACTATAGCGGTAATTAAAAATGGGGCGGTGGCTGAAAAGGGAAGACATGATGAGTTGATGAGGATTACTGATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGTGCATCATAA 3708 0.4107 MLFNFADHLDVTLMIIGTISAVANGLASPLMTLFLGNVINAFGSSNPADAIKQVSKVSLLFVYLAIGSGIASFLQVTCWMVTGERQAARIRSLYLKTILQQDIAFFDTETNTGEVIGRMSGDTILIQEAMGEKVGKFFQLASNFCGGFVMAFIKGWRLAIVLLACVPCVAVAGAFMSIVMAKMSSRGQIAYAEAGNVVDQTVGAIRTVASFTGEKKAIEKYNSKIKIAYTTMVKQGIVSGFGIGMLTFIAFCTYGLAMWYGSKLVIEKGYNGGTVMTVIIALMTGGIALGQTSPSLQAFAAGQAAAYKMFETIRRKPIIDASDTSGAVLEDIKGDIELRDVSFRYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLRWIREQIGLVSQEPILFTTSIRENIAYGKEGATDEEITTAITLANAKKFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALEKIILKRTTVVVAHRLTTIRNADIIAVVQQGKIVERGTHSGLTMDPDGAYSQLIRLQEGDNEAEGSRKSEADKLGDNLNIDSHMAGSSTQRTSFVRSISQTSSVSHRHSQSLRGLSGEIVESDIEQGQLDNKKKPKVSIWRLAKLNKPEIPVILLGAIAAIVNGVVFPIFGFLFSAVISMFYKPPEQQRKESRFWSLLFVGLGLVTLVILPLQNFFFGIAGGKLIERIRSLTFEKIVHQEISWFDDPSHSSGAVGARLSIDASTVKSLVGDTMALIVQNISTVIAGLVIAFTANWILAFIVLVLTPMILMQGIVQMKFLKGFSADAKVMYEEASQVANDAVSSIRTVASFCAESKVMDMYSKKCLGPAKQGVRLGLVSGIGFGCSFLVLYCTNAFIFYIGSVLVQHGKATFTEVFRVFFALTMTAIAVSQTTTLAPDTNKAKDSAASIFEIIDSKPDIDSSSNAGVTRETVVGDIELQHVNFNYPTRPDIQIFKDLSLSIPSAKTIALVGESGSGKSTVISLLERFYDPNSGRILLDGVDLKTFRLSWLRQQMGLVGQEPILFNESIRANIGYGKEGGATEDEIIAAANAANAHSFISNLPDGYDTSVGERGTQLSGGQKQRIAIARTMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGAVAEKGRHDELMRITDGVYASLVALHSSAS* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0585 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1229 IPR027417 -
Mtr2g0585 1235 CDD ABC_6TM_Pgp_ABCB1_D1_like 14 296 - -
Mtr2g0585 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 336 572 IPR003439 GO:0005524
Mtr2g0585 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 671 957 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0585 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 9 1232 IPR039421 -
Mtr2g0585 1235 SMART AAA_5 1019 1206 IPR003593 -
Mtr2g0585 1235 SMART AAA_5 363 555 IPR003593 -
Mtr2g0585 1235 CDD ABC_6TM_Pgp_ABCB1_D2_like 660 975 - -
Mtr2g0585 1235 MobiDBLite consensus disorder prediction 576 631 - -
Mtr2g0585 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 15 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0585 1235 ProSitePatterns ABC transporters family signature. 475 489 IPR017871 GO:0005524
Mtr2g0585 1235 Gene3D ABC transporter type 1, transmembrane domain 60 966 IPR036640 GO:0005524|GO:0016021
Mtr2g0585 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 327 574 IPR027417 -
Mtr2g0585 1235 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 9 1232 - -
Mtr2g0585 1235 ProSitePatterns ABC transporters family signature. 1132 1146 IPR017871 GO:0005524
Mtr2g0585 1235 MobiDBLite consensus disorder prediction 598 631 - -
Mtr2g0585 1235 CDD ABC_MTABC3_MDL1_MDL2 336 574 - -
Mtr2g0585 1235 Gene3D - 334 587 IPR027417 -
Mtr2g0585 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 992 1229 IPR003439 GO:0005524
Mtr2g0585 1235 MobiDBLite consensus disorder prediction 577 594 - -
Mtr2g0585 1235 CDD ABC_MTABC3_MDL1_MDL2 992 1228 - -
Mtr2g0585 1235 SUPERFAMILY ABC transporter transmembrane region 10 320 IPR036640 GO:0005524|GO:0016021
Mtr2g0585 1235 SUPERFAMILY ABC transporter transmembrane region 651 974 IPR036640 GO:0005524|GO:0016021
Mtr2g0585 1235 Gene3D - 982 1234 IPR027417 -
Mtr2g0585 1235 Pfam ABC transporter 1011 1160 IPR003439 GO:0005524
Mtr2g0585 1235 Pfam ABC transporter 355 503 IPR003439 GO:0005524
Mtr2g0585 1235 Pfam ABC transporter transmembrane region 671 942 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0585 1235 Pfam ABC transporter transmembrane region 14 285 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0585 Mtr-Chr2 5881589 5887630 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0585 2 1231 Calmodulin-binding Proteins AT2G36910 44.498 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0585 K05658 - gmx:100801771 1852.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0585 2 5881589 5887630 Mtr2g0585 2 5881589 5887630 ECH