Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0584 ATGATCATTGGTTTCATATGTGCCGTAGCTAATGGATTATCTCAGCCTCTTATGACACTTATTTTTGGAAAACTCATCAACACCTTTGGCTCCACCGATCCATCACACATTGTCAAAGAAGTTTCTAAGGTTGCGTTATTATTTATTTACCTTGGTGTTGGATCTGGAATAGCATCATTTCTACAGGTAGCATGTTGGATGGTGACAGGAGAAAGACAAGCTGCAAGGATTCGTGGCTTGTACTTGAAAACTATACTAAAGCAAGATATTTCCTACTTTGACACTGAAGCAACCAGTGGAGAGGTTATTGGAAGAATGTCTGGTGATACCATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGAAAGTTTATACAACTTATTTCATCTTTTCTTGGTGGATTTGTGATCGCCTTTACAAAAGGATGGGAACTCACTCTTGTTTTGCTTGCATGCATTCCATGTATTGTCATTGTTGGTGGATTTATGTCAATGATGATGGCGAAAATGTCAAGTCGTGGACAAATTGCTTATTCAGAAGCTGGAGTTGTTGTGGAACAAACAGTTGGAGCCATTAGAACAGTTGCCTCTTTTACTGGTGAGGAAAAAGCAACTGAAAAGTACAATAATAAGTTAAGAATTGCTTATAAAAGTACAGTTCAACAAGGGTTGGCCTCAGGGACAGGAATGGGATTACTTTTGCTTATTATCTTTGGCACATATGCACTTGCTATGTGGTATGGTTCCAAACTCATCATTGAGAAAGGATATGATGGTGGAAGTGTCTTCAATATAATCATAGCAATTAATACTGGTGGAATGTCCCTTGGTCAAACTACACCATGCATAAATGCATTTGCAACAGGCCAAGTAGCAGCATGTAAGATGTTCGAGACAATTAAAAGAAAACCGAACATTGATGCTTATGACACAAGTGGTGTTATAATGGAGAACATAAAGGGAGACATTGAACTCAAAGATGTTTACTTTAGATACCCTGCAAGACCAGATGTGCAGATCTTTGCCGGATTCTCATTCTATATTCCAAGTGGCACAACTGCTGCTTTAGTCGGTCAAAGTGGTAGTGGAAAGTCAACTATAATTAGTTTATTAGAAAGATTCTATGATCCTGAAGCTGGAGAAGTGCTTATAGATGGTGTCAACTTGAAGAATTTTCAAGTTAAATGGATAAGAGAACAGATTGGACTTGTTGGTCAGGAACCTGTGTTGTTTACTGCTAGTATCAAGGATAACATTGCTTATGGGAAAGAAGGTGCAACAGATGAGGAAATAGCAACAGCAATAACACTTGCTAATGCTAAAAAATTCATTGATAAACTCCCTCAGGGTCTTGATTCAATGGTAGGAGGTCATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCAAGGGCCATATTGAAGAATCCAAGAATCCTTCTTCTTGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGAAAAAGTTATGACACAAAGGACTACCGTAGTTGTTGCACACCGTTTAACAACTATTAGAAATGCTGACACCATAGCAGTGGTTCATCAGGGCAAAATTGTGGAAAAAGGTACTCATGATGAGTTAGTCAAGGATCCTTGTGGTGCTTACTCTCAGCTTATTAGTCTGCAAAAAGGAGCTAAGGAAGCAGAAAGAAGCAACAGTTCAGAAGAAGATAAGTCAAGGAACAGTTTCAATTTAGATACTCAGAGAACATCCTTTGCAAGATCAATAAGCCAAGGTTCATCAGGAAGTAGACACTCTCTTTCACTTGGCCTAACTCTTCCATATCAAATTTCCGGACATGAATATGTAGAAGGAACCAATGGTGATGATGAAAGTAGTGAACTTGATAATGTGAAACGCCAAAAAGTTTCGGTTAAACGTTTGGCAAAGTTGAATAAGCCTGAGGTTCCTGTAATACTACTTGGATCCATAGCTGCAGCAGTACATGGTGTTACTCTTCCTATATTTGGCCTATTGCTTTCATCATGTATTAAATCTTTCTATAAACCCGCTGAGCAACTTAGAAAAGATTCGGAGTTTTGGTCACTTTTATTTCTTGGTTTGGGTTTTGTTACCCTTGTGGCTCTACCAGTGCAGAACTACTTATTTGGGATTGCTGGTGGGAAACTTGTTGAAAGAATTCGTTCATTGACATTCAAAAAAGTCGTGCACCAAGAAATCAGTTGGTTTGATCATCCTTCAAATTCAAGTGGTGCCGTTAGTGCAAGGTTAGCTACTGATGCTTCAACTGTGAGAACTCTTGTTGGTGACACATTGGCCCTCATTGTGCAAAACATAGCAACAGTAGCAGCAGGACTAGTTATAGCATTTAGTGCCAATTGGATTCTATCTTTTATTATTCTAGCCGTGTCACCATTGATGCTCATACAAGGATACATTCAAACGAAGTTTCTAAAAGGATTCAGTGCAGATGCAAAGGTGATGTATGAAGAGGCAAGTCAGGTTGCAAATGATGCTGTTGGTAGCATCAGAACTGTTGCATCATTTTGTGCTGAACAAAAGGTGATGGATATGTACCAGAAAAAATGTTCAGCACCAGAAAAACAAGGTGTTAGGTTGGGACTTGTTAGTGGTATAGGATTCGGTTTCTCATTTTTTGCTCTATACTGCACAAATGCTTTCTGTTTCTACATAGGATCAGTTCTTATGCAACACGGCAAAGCAACTTTCGGAGAGGTTTTCAAGGTTTTCTTCTGTTTAACAATTACAGCAATAGGTGTTTCGCAGACTAGTGCTTTAGCACCAGATACTAACAAGGCCAAAGATTCTACAGCTTCAATATTTGAAATTCTAGACAGCAAACCAACCATTGACTCAAGTAGTAATGAGGGTGCGACGCTAGAAACTGTGAAAGGTGATTTTGAACTTCAAAAAGTCAGCTTTAGATACCCAACAAGGCCTAATATTCAAATATTCAAAGATTTGTGTCTTAGCATCCCAGCTGGAAAGACTGTTGCCTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTTATAAGTCTCTTGGAGAGATTTTATAACCCTGATTCTGGACATATATTACTAGATGGACTGAATATCAAAACTTTCAAACTAAGCTGGTTGAGACAACAAATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAGGTGCTACGGAGGATGAGATAATTGCAGCAGCTAACGCAGCCAATGCACACAACTTCATAAGCTCTCTTCCAGGTGGTTACAATACTTCGGTAGGCGAAAGAGGCACACAGTTATCAGGTGGACAAAAACAACGTATAGCAATTGCAAGAGCTATATTGAAAAACCCTAGAATACTTTTACTTGATGAGGCAACCAGTGCACTCGATGCTGAGTCAGAACGTGTAGTTCAAGAGGCTTTAGATAGAGTCAGTGTTAACAGAACTACTGTTGTTGTGGCTCATCGTCTTGCAACGATTAAAGGTGCTGATATTATCGCTGTAGTGAAAAATGGGGTGATTGCTGAGAAGGGTAGACATGATTTGTTGATGAAGATTGATGGTGGAATTTATGCTTCATTGGTTGCTCTTCACATTAGTGCATCATAG 3672 0.3935 MIIGFICAVANGLSQPLMTLIFGKLINTFGSTDPSHIVKEVSKVALLFIYLGVGSGIASFLQVACWMVTGERQAARIRGLYLKTILKQDISYFDTEATSGEVIGRMSGDTILIQDAMGEKVGKFIQLISSFLGGFVIAFTKGWELTLVLLACIPCIVIVGGFMSMMMAKMSSRGQIAYSEAGVVVEQTVGAIRTVASFTGEEKATEKYNNKLRIAYKSTVQQGLASGTGMGLLLLIIFGTYALAMWYGSKLIIEKGYDGGSVFNIIIAINTGGMSLGQTTPCINAFATGQVAACKMFETIKRKPNIDAYDTSGVIMENIKGDIELKDVYFRYPARPDVQIFAGFSFYIPSGTTAALVGQSGSGKSTIISLLERFYDPEAGEVLIDGVNLKNFQVKWIREQIGLVGQEPVLFTASIKDNIAYGKEGATDEEIATAITLANAKKFIDKLPQGLDSMVGGHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALEKVMTQRTTVVVAHRLTTIRNADTIAVVHQGKIVEKGTHDELVKDPCGAYSQLISLQKGAKEAERSNSSEEDKSRNSFNLDTQRTSFARSISQGSSGSRHSLSLGLTLPYQISGHEYVEGTNGDDESSELDNVKRQKVSVKRLAKLNKPEVPVILLGSIAAAVHGVTLPIFGLLLSSCIKSFYKPAEQLRKDSEFWSLLFLGLGFVTLVALPVQNYLFGIAGGKLVERIRSLTFKKVVHQEISWFDHPSNSSGAVSARLATDASTVRTLVGDTLALIVQNIATVAAGLVIAFSANWILSFIILAVSPLMLIQGYIQTKFLKGFSADAKVMYEEASQVANDAVGSIRTVASFCAEQKVMDMYQKKCSAPEKQGVRLGLVSGIGFGFSFFALYCTNAFCFYIGSVLMQHGKATFGEVFKVFFCLTITAIGVSQTSALAPDTNKAKDSTASIFEILDSKPTIDSSSNEGATLETVKGDFELQKVSFRYPTRPNIQIFKDLCLSIPAGKTVALVGESGSGKSTVISLLERFYNPDSGHILLDGLNIKTFKLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGATEDEIIAAANAANAHNFISSLPGGYNTSVGERGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALDRVSVNRTTVVVAHRLATIKGADIIAVVKNGVIAEKGRHDLLMKIDGGIYASLVALHISAS* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0584 1223 ProSitePatterns ABC transporters family signature. 462 476 IPR017871 GO:0005524
Mtr2g0584 1223 Pfam ABC transporter transmembrane region 659 930 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0584 1223 Pfam ABC transporter transmembrane region 1 272 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0584 1223 SUPERFAMILY ABC transporter transmembrane region 641 961 IPR036640 GO:0005524|GO:0016021
Mtr2g0584 1223 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1220 IPR039421 -
Mtr2g0584 1223 SUPERFAMILY ABC transporter transmembrane region 1 304 IPR036640 GO:0005524|GO:0016021
Mtr2g0584 1223 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 980 1217 IPR003439 GO:0005524
Mtr2g0584 1223 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 323 559 IPR003439 GO:0005524
Mtr2g0584 1223 Gene3D - 321 574 IPR027417 -
Mtr2g0584 1223 Gene3D ABC transporter type 1, transmembrane domain 50 949 IPR036640 GO:0005524|GO:0016021
Mtr2g0584 1223 CDD ABC_MTABC3_MDL1_MDL2 323 561 - -
Mtr2g0584 1223 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1220 - -
Mtr2g0584 1223 MobiDBLite consensus disorder prediction 562 584 - -
Mtr2g0584 1223 Pfam ABC transporter 344 490 IPR003439 GO:0005524
Mtr2g0584 1223 Pfam ABC transporter 999 1148 IPR003439 GO:0005524
Mtr2g0584 1223 MobiDBLite consensus disorder prediction 567 582 - -
Mtr2g0584 1223 CDD ABC_6TM_Pgp_ABCB1_D2_like 648 963 - -
Mtr2g0584 1223 Gene3D - 970 1222 IPR027417 -
Mtr2g0584 1223 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 296 - -
Mtr2g0584 1223 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 288 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0584 1223 SMART AAA_5 1007 1200 IPR003593 -
Mtr2g0584 1223 SMART AAA_5 350 536 IPR003593 -
Mtr2g0584 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 970 1217 IPR027417 -
Mtr2g0584 1223 CDD ABC_MTABC3_MDL1_MDL2 981 1216 - -
Mtr2g0584 1223 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 659 945 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0584 1223 ProSitePatterns ABC transporters family signature. 1120 1134 IPR017871 GO:0005524
Mtr2g0584 1223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 561 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0584 Mtr-Chr2 5872667 5879994 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0584 1 1219 Calmodulin-binding Proteins AT2G36910 44.163 0.0 1027
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0584 K05658 - gmx:100792531 2009.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0584 2 5872667 5879994 Mtr2g0584 2 5872667 5879994 ECH