Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0583 ATGATCATTGGCACCATCTCTGCCGTTGCTAATGGTATGACACAGCCTATCATGACTCTCATTCTTGGCAAAATCATCAATACCTTTGGCTCAATAGATCCTCACCACATAGTCAAAGAAGTTTCTAAGGTTTCATTATTGTTCATTTACCTGGCTGCTGGATCTGGAATAGTATCATTCCTACAGGTATCATGTTGGATGGTGACAGGAGAAAGACAATCTGCAAGGATTCGTAGTTTGTACTTGAAAACCATATTAAAGCAGGATATTGCATTCTTTGACACTGAAACAAACACAGGAGAAGTAATTGGTAGAATGTCTGGTGACACAATTCTCATTCAAGATGCCATGGGAGAAAAGGTTGGGAAGTTTATTCAACTTGCTGCAACATTTTTTGGTGGCTTTGCGGTTGCCTTCATAAAAGGATGGAGACTAGCTGTAGTTTTGGTTGCATGTATACCTTGTGTTGTTGTGGTTGGTGGATTCATGTCTATGTTGATGGCCAAAATGTCGTCTCGTGGGCAAGCCGCTTATTCAGAAGCAGGAAATGTTGTTGATCAAACAGTAGGGGCCATCAGAACAGTTGCATCTTTTACCGGGGAGAAAAAAGCAATTGAAAATTACAATAGTAAGTTAAAAGTTGCTTATACTACAACAGTTCAACAAGGAATTGCCTCGGGGTTAGGAATGGGGACACTGTCTTTGATTGTCTTTAGCACTTATGGACTGGCCATGTGGTATGGTTCCAAGTTAGTCCTGGAGAAAGGATATACTGGTGGAATTGTCATGGTTGTTATCATAGCTCTCATGACTGGTGGAATGTCATTGGGTCAGACATCACCATGCTTAGATGCATTTGCTGCAGGCCAAGCAGCAGCATATAAAATGTTCGAGACAATTAAAAGAAAGCCTAAAATTGATGCATATGACACAAGTGGTACTGTCTTGAAAGACATAAATGGAGATATTGAACTTAAAGATGTTTATTTCAGTTACCCTGCAAGGCCTGATGTGCAGATCTTTGATGGTTTCTCATTGTTTGTTCCAAGTGGCACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTCCACTGTAATCAGTTTATTGGAAAGATTCTATGACCCTGATGCCGGAGAAGTACTTATAGATGGTGTGAATTTGAAGAACTTGCAACTTAAATGGATAAGAGAACAAATTGGACTGGTTAGTCAAGAACCTATCTTGTTTACCACTACTATCAGAGAGAACATAGCATATGGGAAAGAAGGTGCAACTGATGAAGAGATAACAACAGCTATAACACTTGCAAATGCCAAGAATTTCATTGACAAACTTCCTCAGGGTCTTGACACTATGGCAGGGCAAAATGGGACTCAACTTTCTGGTGGACAAAAGCAAAGAATTGCAATTGCTAGGGCAATATTGAAGAACCCAAGAATCCTTCTTCTCGATGAAGCAACAAGTGCATTGGATGCTGAGTCTGAACGTGTTGTTCAAGAAGCATTGGAAAAAGTTATGACACAAAGAACTACCGTAGTTGTTGCACATCGTTTAACAACTATAAGAAATGCTGACCTAATTGCAGTGGTTCATCAGGGAAAAATCGTGGAAAAAGGAGCACACGATGAGTTAATCAAGGATGACGATGGTGCATATTCTCAGCTCATTCGTCTACAAGAAGGAGAAAAAGAAAACCAAAAGTCTGAAGCAGATAATTCAAGTCACATTTTTAATAGTGAAATGTCTAGATCTTCTAACCGGAGAATTTCCCTTGTGAAATCAATAAGCCAAAGATCATCAGGGAGACACTCCCAATCAAATATATTTCCTCTTCCTCATGAAAGTGGTGTACAAACAGATGAACCAAATATTGAAGAAGGTCAACTTGATAATAAAAAGAAACACAAAAACGTTTCTATAAGACGTTTGGCCTACCTGAACAAACCTGAGGTTCCTGTCTTACTTCTTGGATCTATTGCTGCAATAGTGAACGGTGCAGTGTTCCCTGTATTTGGCCTAGTGTTTTCATCAGCCATTACTATGTTTTATGAACCTCCAAAACAACAAAGGAAAGATGCTAGGCTCTGGTCACTTCTATATGTGGGTCTAGGTTTGGTAACTCTAGTGATTTTACCACTGCAGAATTACTTCTTCGGGATTGCAGGTGGAAAACTTGTAGAAAGAATCCGTTCATTGACATTTGCAAAAGTTGTGCACCAAGAAATAAGTTGGTTTGACGACCCTGCAAATTCAAGTGGTGCAGTTGGTGCAAGGTTATCCACCGACGCTTCAACTGTGAAAAGTCTTGTTGGTGACACATTGGCTCTCATAGTGCAAAACCTATCAACAATCACAGCTGGTCTAATTCTAGCATTCACTTCTAATTGGATTCTGGCTTTTATAGTTTTGGCTGTTTCACCAGTGGTACTTATACAAGGAATTATTCAGATGCAATTTCTTAAAGGATTCAGTGGAGACGCCAAGGTGATGTATGAAGAGGCAAGTCAGGTGGCAAATGATGCTGTTGGTAGCATAAGAACTGTTGCATCATTTAATGCAGAATCAAAGGTGATGGATATGTACCAGAAGAAATGTTCAGGGCCAGAAAAACAAGGTGTTCATTCAGGGCTTGTGAGTGGTGCAGGATTTGGTTTCTCTTTTGTCGCTCTATATTGCATGAGTGCTTTTTGTTTCTACATAGGATCTGTCCTAGTGCAACACGGGAAAGCAACTTTTCAAGAAGTTTTCAAGGTTTTCTTTAGTTTAACTATAACAGCAGTAGGCATTTCACAGTCTAGTACCTTGGCACCCGACACTAATAAGGCCAAAGATTCTGCAGCTTCAATATTTGAAATTCTAGACAGTAACCCTACTATCGACTCCAGCAGCAATGAAGGTGTCACATTAGAAACAGTCACAGGCGATATTGAACTTCAACATGTCAGCTTCAATTACCCAACAAGACCTCACATTCAAATTTTCAAAGATTTATGTCTATACATCCCTGCCGGAAAGACTGTTGCTTTGGTTGGAGAAAGTGGCAGTGGAAAATCAACAGTTATAAGTCTCTTAGAGAGATTTTATAACCCTGACTCTGGACGTATATTACTAGATGGAGTGGATATAAAAACTTTCAGACTAAGCTGGTTGAGACAACAGATGGGTTTGGTTGGTCAAGAGCCTATTCTTTTCAACGAAAGCATTCGTGCCAACATAGCTTATGGCAAAGAAGGAGGTGCTATGGAGGATGAGATAATTGCAGCAGCTAAAGCAGCCAATGCACACAATTTCATAAGCTCTCTTCCAAATGGTTATGACACCTCTGTCGGGGAAAGAGGCACACAGCTATCAGGAGGACAGAAGCAGCGTATTGCTATTGCAAGAGCCATGCTGAAAAACCCCAAAATACTTTTGCTTGACGAGGCGACAAGTGCACTTGATGCTGAGTCAGAGCGTATAGTTCAAGAGGCTCTAGATAGAGTGAGTGTGAACAGAACTACTGTGGTGGTGGCTCACCGTCTTACAACAATTCGAGGGGCTGATACTATAGCCGTGATTAAAAATGGGGTGGTGGCTGAAAAGGGAAGACATGAAGTGTTGATGAAGATTACTGATGGTGTTTATGCTTCATTAGTAGCTCTTCATTCAAGCGCATCATAA 3666 0.4051 MIIGTISAVANGMTQPIMTLILGKIINTFGSIDPHHIVKEVSKVSLLFIYLAAGSGIVSFLQVSCWMVTGERQSARIRSLYLKTILKQDIAFFDTETNTGEVIGRMSGDTILIQDAMGEKVGKFIQLAATFFGGFAVAFIKGWRLAVVLVACIPCVVVVGGFMSMLMAKMSSRGQAAYSEAGNVVDQTVGAIRTVASFTGEKKAIENYNSKLKVAYTTTVQQGIASGLGMGTLSLIVFSTYGLAMWYGSKLVLEKGYTGGIVMVVIIALMTGGMSLGQTSPCLDAFAAGQAAAYKMFETIKRKPKIDAYDTSGTVLKDINGDIELKDVYFSYPARPDVQIFDGFSLFVPSGTTTALVGQSGSGKSTVISLLERFYDPDAGEVLIDGVNLKNLQLKWIREQIGLVSQEPILFTTTIRENIAYGKEGATDEEITTAITLANAKNFIDKLPQGLDTMAGQNGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERVVQEALEKVMTQRTTVVVAHRLTTIRNADLIAVVHQGKIVEKGAHDELIKDDDGAYSQLIRLQEGEKENQKSEADNSSHIFNSEMSRSSNRRISLVKSISQRSSGRHSQSNIFPLPHESGVQTDEPNIEEGQLDNKKKHKNVSIRRLAYLNKPEVPVLLLGSIAAIVNGAVFPVFGLVFSSAITMFYEPPKQQRKDARLWSLLYVGLGLVTLVILPLQNYFFGIAGGKLVERIRSLTFAKVVHQEISWFDDPANSSGAVGARLSTDASTVKSLVGDTLALIVQNLSTITAGLILAFTSNWILAFIVLAVSPVVLIQGIIQMQFLKGFSGDAKVMYEEASQVANDAVGSIRTVASFNAESKVMDMYQKKCSGPEKQGVHSGLVSGAGFGFSFVALYCMSAFCFYIGSVLVQHGKATFQEVFKVFFSLTITAVGISQSSTLAPDTNKAKDSAASIFEILDSNPTIDSSSNEGVTLETVTGDIELQHVSFNYPTRPHIQIFKDLCLYIPAGKTVALVGESGSGKSTVISLLERFYNPDSGRILLDGVDIKTFRLSWLRQQMGLVGQEPILFNESIRANIAYGKEGGAMEDEIIAAAKAANAHNFISSLPNGYDTSVGERGTQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAESERIVQEALDRVSVNRTTVVVAHRLTTIRGADTIAVIKNGVVAEKGRHEVLMKITDGVYASLVALHSSAS* 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0583 1221 MobiDBLite consensus disorder prediction 573 615 - -
Mtr2g0583 1221 CDD ABC_6TM_Pgp_ABCB1_D2_like 646 961 - -
Mtr2g0583 1221 ProSitePatterns ABC transporters family signature. 462 476 IPR017871 GO:0005524
Mtr2g0583 1221 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 1 1218 - -
Mtr2g0583 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 967 1215 IPR027417 -
Mtr2g0583 1221 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 288 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0583 1221 Pfam ABC transporter 342 490 IPR003439 GO:0005524
Mtr2g0583 1221 Pfam ABC transporter 997 1146 IPR003439 GO:0005524
Mtr2g0583 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 561 IPR027417 -
Mtr2g0583 1221 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 1 1218 IPR039421 -
Mtr2g0583 1221 MobiDBLite consensus disorder prediction 562 626 - -
Mtr2g0583 1221 CDD ABC_MTABC3_MDL1_MDL2 323 561 - -
Mtr2g0583 1221 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 657 943 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0583 1221 SUPERFAMILY ABC transporter transmembrane region 638 959 IPR036640 GO:0005524|GO:0016021
Mtr2g0583 1221 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 978 1215 IPR003439 GO:0005524
Mtr2g0583 1221 ProSitePatterns ABC transporters family signature. 1118 1132 IPR017871 GO:0005524
Mtr2g0583 1221 SMART AAA_5 350 536 IPR003593 -
Mtr2g0583 1221 SMART AAA_5 1005 1192 IPR003593 -
Mtr2g0583 1221 SUPERFAMILY ABC transporter transmembrane region 1 307 IPR036640 GO:0005524|GO:0016021
Mtr2g0583 1221 Gene3D - 968 1220 IPR027417 -
Mtr2g0583 1221 CDD ABC_MTABC3_MDL1_MDL2 978 1214 - -
Mtr2g0583 1221 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 323 559 IPR003439 GO:0005524
Mtr2g0583 1221 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 283 - -
Mtr2g0583 1221 Pfam ABC transporter transmembrane region 657 929 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0583 1221 Pfam ABC transporter transmembrane region 1 273 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mtr2g0583 1221 Gene3D - 321 582 IPR027417 -
Mtr2g0583 1221 Gene3D ABC transporter type 1, transmembrane domain 57 952 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0583 Mtr-Chr2 5806979 5812972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0583 1 1217 Calmodulin-binding Proteins AT2G36910 45.418 0.0 1058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0583 K05658 - gmx:100801771 1914.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0583 2 5806979 5812972 Mtr2g0583 2 5806979 5812972 ECH