Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr2g0566 | ATGGATTTTCCAAATGAATCCATGTCAGATTCTCCACAGAGAAAGATTGGAAGGGGAAAGATTGAGATCAAAAGGATTGAAAACACGACGAATCGTCAAGTAACTTTCTGCAAAAGAAGAAATGGTTTGTTGAAGAAAGCATATGAATTATCTGTTCTTTGTGATGCAGAAGTTGCTCTTATAGTCTTCTCTAGCCGTGGACGGCTCTATGAGTATGCTAATAACAGTGTCAAAGAGACTATTGCAAGGTACAAAAAAGCATGTTCAGATTCATCTGGCACTGGATCTGCTACTGAGGCTAATGCTCAGTTTTACCAGCAAGAGGCAGACAAATTGCGTGTGCAAATTAGTAACCTGCAGAATAACAACAGGCAAATGATGGGTGAATCTTTGGGCTCTATGAATGCCAAGGAACTGAAAAATCTGGAGTCTAAATTAGAAAAAGGAATTAGTCGGATTCGTTCCAAAAAGAATGAGCTGTTATTTGCTGAAATTGAATACATGCAGAAGAGGCAGGAGATAGACTTGCACAATAACAACCAACTTCTGAGAGCAAAGATAGCTGAAAGTGAGAGGAACCATAGCCACCATAGCAATATTAATATGAGTATGTTGCCTGGAGGCACAAACTATGAACCTATGCAGTCTCAGAATCAGCAGCAGCAATATGAGTCTCGTGGATACTTTCAAGTTTCTGGATTACAATCCAGTAGTAGTCAAATGACTGCATTACAACCAAGTAGTCAGTATGCAAGACAAGACCACATGTCCCTTCAATTAGTTTGA | 786 | 0.3944 | MDFPNESMSDSPQRKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKETIARYKKACSDSSGTGSATEANAQFYQQEADKLRVQISNLQNNNRQMMGESLGSMNAKELKNLESKLEKGISRIRSKKNELLFAEIEYMQKRQEIDLHNNNQLLRAKIAESERNHSHHSNINMSMLPGGTNYEPMQSQNQQQQYESRGYFQVSGLQSSSSQMTALQPSSQYARQDHMSLQLV* | 262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr2g0566 | 261 | MobiDBLite | consensus disorder prediction | 190 | 224 | - | - | |
Mtr2g0566 | 261 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 25 | 72 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | PRINTS | MADS domain signature | 18 | 38 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | PRINTS | MADS domain signature | 38 | 53 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | PRINTS | MADS domain signature | 53 | 74 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | SUPERFAMILY | SRF-like | 17 | 88 | IPR036879 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | MobiDBLite | consensus disorder prediction | 239 | 261 | - | - | |
Mtr2g0566 | 261 | CDD | MADS_MEF2_like | 17 | 91 | IPR033896 | GO:0000977|GO:0045944 | |
Mtr2g0566 | 261 | ProSitePatterns | MADS-box domain signature. | 18 | 72 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | ProSiteProfiles | MADS-box domain profile. | 16 | 76 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | Coils | Coil | 102 | 129 | - | - | |
Mtr2g0566 | 261 | ProSiteProfiles | K-box domain profile. | 102 | 193 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Mtr2g0566 | 261 | SMART | madsneu2 | 16 | 75 | IPR002100 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 17 | 239 | - | - | |
Mtr2g0566 | 261 | MobiDBLite | consensus disorder prediction | 197 | 224 | - | - | |
Mtr2g0566 | 261 | Coils | Coil | 139 | 173 | - | - | |
Mtr2g0566 | 261 | Pfam | K-box region | 99 | 187 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Mtr2g0566 | 261 | Gene3D | - | 28 | 94 | IPR036879 | GO:0003677|GO:0046983 | |
Mtr2g0566 | 261 | PANTHER | FLORAL HOMEOTIC PROTEIN AGAMOUS-LIKE | 17 | 239 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr2g0566 | Mtr-Chr2 | 5588584 | 5596945 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr2g0566 | 14 | 261 | MADS-box Gene Family | AT3G58780 | 64.113 | 2.03e-104 | 301 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MADS-MIKC | Mtr2g0566 | K-box | 3.2e-26 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr2g0566 | K09264 | - | gmx:732595 | 384.03 |