Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0554 ATGGCAACAAGAAAAAGCAAAGCCATAGGCATTGACCTTGGTACAAGCTACAGCTGCATTGCAGTGTGGCGAAACAATCGTGTTGAGATCATTCCAAACGACCAAGGGAACCGTGTCACCCCTTCTTACGTTGCCTTCACTGACACTGAAAGATTAATAGGCGATGCTGCCAAAAACCAATTAGCCAAATATCCCCACAACACTGTTTTTGATGCCAAACGTCTGATTGGCCGTCGATTCTCTGACCAAACAGTCCAACAAGACATAAAGCTTTGGCCTTTTAAAGTTGTTCCGAACCACAAAGACAAACCCATGATTGTTGTCAATTACAAAGGCCAAGAGAAACATTTTTCACCTCAAGAGATATCTTCCATGGTGTTGTCTAAGTTAAAGGAAGTTGCTGAAACTTATTTGGGTCATGAAGTGAACAATGCTGTTATCACTGTTCCTGCCTACTTCAACAACTCACAGAGACAAGCTACAAATGATGCAGGAAAAATTGCCGGTTTTAATGTGATGAGGATCATCAACGAGCCTACTGCAGCTGCTATTGCTTATGGTTTGGACAAGAAAATGTGGAGAGAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGAACATTCGATGTTTCCTTAGTGACCATTGATGAAGGAATGTTCCAGGTTAAGGCCACATTGGGAGATACTCATTTGGGTGGTATTGATTTCGATAACAATTTGGTGAACCGTCTTGTTGAATTATTTCATAGAAAGTACAAGAAGGATTTGAAGATCAGTGAGAATTTCAAAGCTTTGGGGAGGTTAAGATCAGCATGTGAGAAAGCAAAGAGGTTACTTTCTTCATCTTCACAAACAGTTATTGAGCTTGATTCTCTATGTGGAGGGATTGATCTACATTTCACTGTTACTAGAGCTTTCTTTGAGGAAATAAACAAGGATTTGTTCAAAAAGTGCATGGAGACTGTGGAGAAGTGTTTGGTTGAGGTAAAAATTAGTAAAAGCCAAGTTCATGAGTTTGTTCTTGTAGGAGGGTCTACTAGAATTCCGAAGATTCAACAACTATTGAAGAATATGTTTAGAGTCAACGATGAAGTCAAAGAGCCTTGCAAAAGCATTAATCCTGATGAAGCTGTGGCTTATGGCGCCGCTGTTCAAGCAGCAATATTGAATACTGAAGGAGACAAGAAAATCGAAGACTTGTTACTGTTGGATGTTATGCCTTTTAGTCTTGGTGTTGAAACTAAAGGTGGTGTCATGTCTGTTTTGATTCCAAAGAATACTATGATCCCTACGAAAAAGGAAAATGTATTCTCTATAGCCTGTGATAATCAAGATAGTCTTTTGATCAAAGTGTATGAAGGAGAACATGCTAAGACTGAGGACAACTTTTTGCTTGGTAAATTTGAGCTCTCAGGATGCTCTTTAGTACCAAGAAAGGTTCCAAATATCAATGTTTGTTTTGATGTTGATGTTAATGGAATTTTGGAGGTTACTGCTGAAGATAAGACAATAGGGTTGAAACAGAAGATCACTATCACCAACAAGGAGGGAAGGTTGAGTCCTGAAGAGATGAGAAGAATGATGAGGGATGCCGAGCGGTATAAGGCAGAGGATGAGGAGGTTAGGAAGAAGGTGAAAGCAAAGAACTTGTTTGAGAATTATGTTTATGAAATGAGGGAGAGAGTGAAGAAACTTGAGAAGGTAGTGGAGGAAAGTATAGAATGGTTTGAAAGAAACCAATTGGCAGAAATTGATGAGTTTGAATTCAAGAAGCAGGAGTTGGAAAATAGTATGAAGTTTCTCTAA 1812 0.3935 MATRKSKAIGIDLGTSYSCIAVWRNNRVEIIPNDQGNRVTPSYVAFTDTERLIGDAAKNQLAKYPHNTVFDAKRLIGRRFSDQTVQQDIKLWPFKVVPNHKDKPMIVVNYKGQEKHFSPQEISSMVLSKLKEVAETYLGHEVNNAVITVPAYFNNSQRQATNDAGKIAGFNVMRIINEPTAAAIAYGLDKKMWREGEKNVLVFDLGGGTFDVSLVTIDEGMFQVKATLGDTHLGGIDFDNNLVNRLVELFHRKYKKDLKISENFKALGRLRSACEKAKRLLSSSSQTVIELDSLCGGIDLHFTVTRAFFEEINKDLFKKCMETVEKCLVEVKISKSQVHEFVLVGGSTRIPKIQQLLKNMFRVNDEVKEPCKSINPDEAVAYGAAVQAAILNTEGDKKIEDLLLLDVMPFSLGVETKGGVMSVLIPKNTMIPTKKENVFSIACDNQDSLLIKVYEGEHAKTEDNFLLGKFELSGCSLVPRKVPNINVCFDVDVNGILEVTAEDKTIGLKQKITITNKEGRLSPEEMRRMMRDAERYKAEDEEVRKKVKAKNLFENYVYEMRERVKKLEKVVEESIEWFERNQLAEIDEFEFKKQELENSMKFL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0554 603 Pfam Hsp70 protein 8 599 IPR013126 GO:0005524|GO:0140662
Mtr2g0554 603 Gene3D - 191 371 - -
Mtr2g0554 603 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Mtr2g0554 603 PANTHER HEAT SHOCK PROTEIN 70KDA 4 598 IPR013126 GO:0005524|GO:0140662
Mtr2g0554 603 SUPERFAMILY Actin-like ATPase domain 6 190 IPR043129 -
Mtr2g0554 603 SUPERFAMILY Actin-like ATPase domain 197 391 IPR043129 -
Mtr2g0554 603 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 574 IPR029047 -
Mtr2g0554 603 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 549 600 IPR029048 -
Mtr2g0554 603 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 398 554 IPR029047 -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 7 20 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 35 47 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 57 65 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 145 165 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 208 218 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 374 394 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 401 420 - -
Mtr2g0554 603 PRINTS 70kDa heat shock protein signature 482 498 - -
Mtr2g0554 603 Gene3D - 9 389 - -
Mtr2g0554 603 Coils Coil 526 546 - -
Mtr2g0554 603 Gene3D - 70 125 - -
Mtr2g0554 603 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Mtr2g0554 603 Coils Coil 579 599 - -
Mtr2g0554 603 Gene3D Actin; Chain A, domain 4 234 319 - -
Mtr2g0554 603 PANTHER SHOCK PROTEIN, PUTATIVE-RELATED 4 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0554 Mtr-Chr2 5487950 5489899 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0554 1 597 Calmodulin-binding Proteins AT1G16030 68.249 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0554 K03283 - gmx:100788531 905.975