Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0551 ATGTTTAAGAAACTATATATCTACTCAAACTATAACTACTTCTCAAATAGTTTTTCTCATCAATTGTTTGTCAATAGCAGAGCCACATTCATTTCTTGCGCCATTTTTCAGCTTCATATAAAAAATATATGTAGTATATATTTATTTTTGTCAACCATGACTGATAATTCAGAAAGCAACGAAATTCATCATGAGGTAGTTTTAGATGTAAATAGTCATGCCTCACAAAATTGTGAAGAATCAGGCATCAAAGACTCTGTGCCCCTTCTCAAGAAGCTGGTAGCAGAAGTGGTGGGAACATACATGATGATATTTGCGGGTTGTGCTGCTGTTATTGTGAATCTTAACAATGATCATGTAGTAACACTTCCTGGAATTGCATTTGCTTGGGGATTCACTGTTATGGTTTTGATTTACTCTGTTGGTCACATTTCTGGTGCTCATTTCAACCCTGCTGTTACCATTGCTTTTGCTTCTACGAGAAGATTTCCCTTCAAGCAAGTACCAACTTATATGATAGCTCAGGTCCTTGGATCCACATTAGCAAGTGGAAGCCTCAGACTAATATTTAATGGTGAAGATGATCATTTTATTGGAACACTTCCAGCTGGTTCTAATTTGCAAGCTTTTGTAATCGAGTTCATATGCACTTTCTTCCTTATGTTTGTTATTACTGCAGTAGCCACCGATAACAGAGCGATTGGTGAATTAGCCGGACTTGCGATTGGGTCTACAATAATAATAGATATATTGTTTGCGGGACCAATGACGGGAGCATCGATGAATCCAGCAAGGAGTTTAGGACCTGCTTTTTTATACGACAATTATACAGGATTATGGATATATTTGATTGCACCAATTCTAGGAGCTTTGGTAGGTACATGGACTTACAATTTCATCAGGCACACAAACAAGCCAACGTGTGATGAGCTCCCTAAGATTGAGCTCACCAAGATTGTCCCTTTCCTTAGGAGGAGCAGGTCGTAA 987 0.382 MFKKLYIYSNYNYFSNSFSHQLFVNSRATFISCAIFQLHIKNICSIYLFLSTMTDNSESNEIHHEVVLDVNSHASQNCEESGIKDSVPLLKKLVAEVVGTYMMIFAGCAAVIVNLNNDHVVTLPGIAFAWGFTVMVLIYSVGHISGAHFNPAVTIAFASTRRFPFKQVPTYMIAQVLGSTLASGSLRLIFNGEDDHFIGTLPAGSNLQAFVIEFICTFFLMFVITAVATDNRAIGELAGLAIGSTIIIDILFAGPMTGASMNPARSLGPAFLYDNYTGLWIYLIAPILGALVGTWTYNFIRHTNKPTCDELPKIELTKIVPFLRRSRS* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0551 328 PANTHER AQUAPORIN NIP2-1 55 325 IPR034294 -
Mtr2g0551 328 TIGRFAM MIP: MIP family channel proteins 95 297 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 CDD MIP 91 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 Pfam Major intrinsic protein 86 297 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 SUPERFAMILY Aquaporin-like 87 308 IPR023271 -
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 91 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 130 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 167 186 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 212 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 243 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 PRINTS Major intrinsic protein family signature 280 300 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mtr2g0551 328 ProSitePatterns MIP family signature. 148 156 IPR022357 -
Mtr2g0551 328 Gene3D Glycerol uptake facilitator protein. 50 311 IPR023271 -
Mtr2g0551 328 PANTHER AQUAPORIN NIP1-1-RELATED 55 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0551 Mtr-Chr2 5457529 5459743 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0551 41 324 Major Intrinsic Protein MIP AT5G37820 51.034 8.28e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0551 K09874 - gmx:100786924 385.571