Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0531 ATGACTAGGGCTATTCGGAATAGGGTACTCAAAGATGCAAATGGTGATATTAGTGATCATATAAGAAACCACATCCATTTAACAAATTGTATTCACTTGAAGAACCATATGCATAAAAACAGTCCAATAATTGCTGATAGGTCTATTATGAGAGACCTTGTTGTGCTTCAAAGATCGCGCTCTCTTCGAGATCCTTCTGCAAGTCCTCCATCATGGCACTCTCCTTCTGTAGTTGACTTGCTTTTCAAAAGAGCCGATAATGATGGTGCGAGTCAAGGGGGAAGGAGGTCTGTAGGTAATGACAGTAGGAAGGAAGGTGGGAAATTGTCTAAAATTGGAAACTCGCCACCGTTGGTGAGTAAAGGTACATCAAGGGTTGCTCCAGGTGAGGGTAGTAGGGGTAATGATGCGGTACCTGCGGCAACTAGTGAACGAAGTAGCAGGAGTGGAATTGGGAATGGGAGGAGAGTTGGGAGAGAAGAATCTGGCAGGAAGAGTAATAGGCCTGATTATTTGGAAGTTACTAGTCAAGAACAACTTCTTCACGAGGCTGGAAAAAGTTTGGCTGAAGATGTAGTTTCGAGGCATTCTCAATCCATAGAGAGAAAGAGTAGGCAGAGGGGAAAGAATGTTCAAGATGTTCAAGCTAAGACTCTTTCTGAACAGTTGCATGATGTTCCTTTGGATAGCGATGATCTAGCGTCGTCAAACATCCATTTTCGGGCAAGGTTTCGAAGACAGGAAAAAATAATTGAGCAGGCACAACAAGCTAGCGTGCGCAGTCATGCAAATGGAATGAATAGGATAAAAAGGCGTAAATTCCGAAGCACAAGAAAAGCTCGGGTTGCTACAACGTCAAGAGATATTGGAGCTGAGAATGAATTGTCTGTGGCTTCCAATTCATTACCTGAGGGTTCAGCTCACCAGAAATATCACTCGGAGGAGGTGGATAATTATGCAGATGATAATGTTACCAGGGCTCCGAAAAACGGGTGTGGCATGCCTTGGAATTGGTCCAGAATTCATCATAGAGGTAAAACATTCCTTGATATTGCTGGAAGAAGTTTGTCTTGTGGTTTATCTGACTCAAGGTTAAAGAAAGGGAGATCGTTAACTTCCAATGGAAGAAATATTTCTGTGATGCCTGTAGCAGCTGACGACTCTTGCTCATGTACTAACTCTGAAGCAGAAGCACTGCCTTTACTTGTTGATGCATCTGGATCTCATGGAAGCACTGAAAATGCTTGTTGGGGCCATGGTTATTCTGGTGAACTAGGTATTTATGGTGATAATTTATTCAAGCAAGATATTGATTCTGATCTTGCTTCTGAAGCTAGATCTGGTAGCCAGCATAATAAGTTGAGACGGAATCATCATAGTAGACACCAAAGTTTAACACAAAAGTATATTCCACGAACCTTCAGAGATATGGTTGGACAGAATTTAGTGGCGCAAGCTCTTTCGAATGCAGTGTCAAGACGGAAAGTTGGATTGCTGTATGTGTTTTATGGTCCCCATGGCACCGGGAAAACTTCCTGTGCTCGCATATTTGCCAGAGCATTGAATTGTAGTTCGTCGGAACACCCAAAACCCTGTGGTTTTTGCAATTATTGCATAGCACATGATATGGGAAAGAGTAGAAATATAAGGGAAGTTGGTCCAGTTAGTAATTTTGACTTTGAGAACATCATGGATCTACTTGACAATATGATTGTTTCTCAGCTTCCGTCACAGTACAGAGTGTTTATTTTCGATGATTGTGATTCTTTGTCGGCAGATTGTTGGAACGCTATATCAAAGGTCATTGATCGAGCACCTAGACGTGTGGTTTTTATCCTTGTCAGTACTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCGAAGCTTAAGGATTCAGATATCGTATATACACTGCACGGGATTGCAACCAAAGAAGGGCTAGATATTGATAAGGATGCCTTGAAACTCATTGCATCAAGGTCCGACGGATCATTGAGAGATGCTGAGATGACACTTGAACAACTTAGTTTGCTTGGGCAGAGAATTTCCGTTCCTCTTGTTCAAGAGCTGGTAGGGCTTATCTCTGATGAGAAGTTGGTAGATCTGCTTGATTTAGCATTATCTGCGGACACGGTAAACACTGTGAAGAATTTGAGAGTGATAATGGAAGCAGGTGTTGAGCCATTAGCATTGATGTCACAGCTTGCTACAGTAATTACTGATATACTTGCTGGGACCTACGATTTCACTAAAGAAAGGTGCAGACGGAAGTTCTTCCGGAGACAACCACTGTCCAAAGAAGACATGGAAAAGCTTCGCCAGGCTTTGAAAACTTTATCTGAGGCGGAGAAGCAGTTAAGGATGTCCAATGACAAGCTAACATGGCTGACAGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATGGGTTGCCGACTTCATCTGATAATAGTTTCAACCATAGTCCATTCGCTCTAAATAATGGAAATGTGAAAGAAGCTACTAGAAACACTGGTAATCCTGTTGAAATTCTTAACAGAACAAGGCGAATGTCAATGGATGCTAGAATGGAAAGTTCTAATGCTGGAAGTTCAGCAGATAGAAGACATAGTTTGTCTGGTTATGCTCCTCAACATACTTATTCACATTCCACCGATAAGACTAGGATCAATGAAAGGCAGACTTCTGATAGAAACCGCAAAGAAATTGATGAGATATGGTTAGAGGTGCTAGAGAGGATTCACTATCCCGGTCTCAAAGAGTTTTTGTATAAAGCAGGCAAGCTGATCTTCATTAGTTTTGGAGCAGCTCCAACAGTGCAGCTAATGTTTAACTCTCAACTTTCCAAATCTACTGCTGAGAAGTTTACTGGTCACATCTTACAAGCATTTGAATCTGTTCTTGGGTCTTCTGTAACCATAGAAATTAGATGTGAGGCAAATAAAGATGCAGGCTCTCCTGTTCAACTTCCTCTTGTATTGCCTTCTATCAATGACGGCTCATCTCAGGTTAGAGACTTAAATGATGTTGGCACTGAAAAGAGAAGGAGTGAAATTGTAGAAGAAGAAGCTTCCCATATGGAGCACAAGAATAATGAGCAACAGGTTGATGGTCACGCAACATATAAAAATCAAGATGGTACGAGTATGGGACAAGTGTTAGCTTCCCAAAAAGTACCGATCGTTAAGTCACATTTAGTCCGAAGAAAGCTTAGTGAGCAAAGTCAAAGTCGAAGTCTTGTAAAAAGTAAGGTATCTCTCGCTCATGTAATCCAGCGGGCAGAAGGTCAGCGAAGTGGGTGGTCAAAACGCAAAGCAGTTTCTATTGCTGAAAAGCTTGAACAAGAGAATCTGAGATTGGAGCCAAGATCAAGGAGCTTGCTATGCTGGAAAGCATCTAGAGCGACTCGTAGGAAGCTGTCGCGCTTGAAAATCCGAACCCAAAAAACACATGCATTGCTGAACCTTGTCTCATGTGGGAAATGTCTCGCCACCAAATCTCCAAGGTAG 3534 0.4202 MTRAIRNRVLKDANGDISDHIRNHIHLTNCIHLKNHMHKNSPIIADRSIMRDLVVLQRSRSLRDPSASPPSWHSPSVVDLLFKRADNDGASQGGRRSVGNDSRKEGGKLSKIGNSPPLVSKGTSRVAPGEGSRGNDAVPAATSERSSRSGIGNGRRVGREESGRKSNRPDYLEVTSQEQLLHEAGKSLAEDVVSRHSQSIERKSRQRGKNVQDVQAKTLSEQLHDVPLDSDDLASSNIHFRARFRRQEKIIEQAQQASVRSHANGMNRIKRRKFRSTRKARVATTSRDIGAENELSVASNSLPEGSAHQKYHSEEVDNYADDNVTRAPKNGCGMPWNWSRIHHRGKTFLDIAGRSLSCGLSDSRLKKGRSLTSNGRNISVMPVAADDSCSCTNSEAEALPLLVDASGSHGSTENACWGHGYSGELGIYGDNLFKQDIDSDLASEARSGSQHNKLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQALSNAVSRRKVGLLYVFYGPHGTGKTSCARIFARALNCSSSEHPKPCGFCNYCIAHDMGKSRNIREVGPVSNFDFENIMDLLDNMIVSQLPSQYRVFIFDDCDSLSADCWNAISKVIDRAPRRVVFILVSTSLDVLPHIIISRCQKFFFPKLKDSDIVYTLHGIATKEGLDIDKDALKLIASRSDGSLRDAEMTLEQLSLLGQRISVPLVQELVGLISDEKLVDLLDLALSADTVNTVKNLRVIMEAGVEPLALMSQLATVITDILAGTYDFTKERCRRKFFRRQPLSKEDMEKLRQALKTLSEAEKQLRMSNDKLTWLTAALLQLAPDQQYGLPTSSDNSFNHSPFALNNGNVKEATRNTGNPVEILNRTRRMSMDARMESSNAGSSADRRHSLSGYAPQHTYSHSTDKTRINERQTSDRNRKEIDEIWLEVLERIHYPGLKEFLYKAGKLIFISFGAAPTVQLMFNSQLSKSTAEKFTGHILQAFESVLGSSVTIEIRCEANKDAGSPVQLPLVLPSINDGSSQVRDLNDVGTEKRRSEIVEEEASHMEHKNNEQQVDGHATYKNQDGTSMGQVLASQKVPIVKSHLVRRKLSEQSQSRSLVKSKVSLAHVIQRAEGQRSGWSKRKAVSIAEKLEQENLRLEPRSRSLLCWKASRATRRKLSRLKIRTQKTHALLNLVSCGKCLATKSPR* 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0531 1177 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 500 684 IPR027417 -
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 87 171 - -
Mtr2g0531 1177 SUPERFAMILY post-AAA+ oligomerization domain-like 708 811 IPR008921 GO:0003677|GO:0006260
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 188 213 - -
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 444 466 - -
Mtr2g0531 1177 CDD HLD_clamp_pol_III_gamma_tau 637 700 IPR045085 -
Mtr2g0531 1177 Pfam DNA polymerase III subunits gamma and tau domain III 693 752 IPR022754 GO:0003887
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 188 210 - -
Mtr2g0531 1177 Pfam DNA polymerase III, delta subunit 480 637 - -
Mtr2g0531 1177 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 463 811 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 863 904 - -
Mtr2g0531 1177 Gene3D - 454 634 IPR027417 -
Mtr2g0531 1177 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 185 1144 - -
Mtr2g0531 1177 PANTHER PROTEIN STICHEL-LIKE 3 185 1144 - -
Mtr2g0531 1177 CDD AAA 478 637 - -
Mtr2g0531 1177 MobiDBLite consensus disorder prediction 154 168 - -
Mtr2g0531 1177 Gene3D - 638 700 - -
Mtr2g0531 1177 Coils Coil 773 800 - -
Mtr2g0531 1177 SMART AAA_5 496 637 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0531 Mtr-Chr2 5301634 5307981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0531 463 761 Core DNA Replication Machinery Family AT1G21690 24.013 2.06e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0531 - - gmx:100809005 1851.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0531 2 5301634 5307981 Mtr2g0531 2 5301634 5307981 ECH