Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0516 ATGGCCAAGTTATACTCTTTTCACTCTTTGCTCTTTATTCTCTCTGCCTCACTCTATTATTACCTCTTCACTTGCTTAGCTATGATTTCTAAAACCATCACCACAGATGAATTTGCACTTCTTGCATTCAAATCCTCAATTACCTTAGACCCTTATGATATTCTTAGTAATTGGTCAATTTCCTCTTCTACTTCTTCTTTCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAGTGAATGCATTGGATCTTAATAACATGGACCTTGAAGGTACAATTTCTCCTCAATTGGGAAATCTTTCTTTCCTTGTTGTTCTTGATTTACAAGGCAATAGTTTCTATGGTGAGTTACCACATGAGTTACTTCAGTTGAAGAGATTGAAATGGTTGGATTTGAGTGACAATGATTTTGTTGGAGAAATTCCTTCAAGGATAGGGGACTTAGCAAAACTTCATCATTTGGATCTTTACTTTAATAATTTTGTTGGAGCTATTCCTCAATCTATATCCGACTTGTCAATGTTACGGTACCTAGATTTGAGTACAAATTTCATCAAAGGAACCATTCCACATGCCATTGGTCAACTTGGTATGTTGAGGATTTTGGATATTAGAAATAACAAGCTCTGTGGAATCCTACCAACAACAATATCCAACATGTCTTCACTTGAAGAAATTCATTTAGCAAATAACTCCTTATCGGGAGAAATTCCAAAAGGAATTGGTGATCTTACAGAACTGAACACGGTCAACCTTGAAGATAATTTGCTCACAGGCAACATATTAATGTTCAACAACACATCATTGCAATACTTATATCTTGGATATAATAATATGACCGGCGTTCTTCCATCAAATGTTTGTCAATGGCTTCCAAACCTTAGATTACTCTATCTTTTTCATAATGATTTTTCTGGTGAGATTCCAAATGTTTGGCGTGATTGCAAAGAGTTGGAAGATTTGCAACTATCCGGGAATAATTTTGACAAAGGACGTATTCCGGCTGATATTGGAAAATTGATCAAACTTCAAGTTTTGTATCTCGCAGAAAACAACTTCGAGGGTGAAATTCCATTGTCCCTCTTCAACATCTCTTCTTTGAGAGTGATCAGCCTTCGTAGTAACAATTTAAATGGAACTCTTCCACGATCGATTGGCAACTGCACATTTTTACAAAAGTTATATTTCACTAATAACTTTTTTACAGGTTCAATACCAAAGGAGATTGGCCATCTCAATCAACTTCAGCTTCTATTTATGAAAAATAACAGCTTGAGTGGGCCTATTCCTTCACAAGTCTTCAACATTTCAACATTGAAATATTTGCGTCTTGAACTAAATTCTTTCTCAGGCATGCTTCCATCAAATTTTGGATTTGGACTTCCTAACCTACAATTCCTCCAAATGTATGGAAACAAATTTGTTGGAAAAATTCCAAATACTATATCCAATGCTTCAAATCTCTTTTCAGTTAGCTTTAGCGATAATGAATTTAGTGGAATTATTCCCAATTCTTTTGGGGATTTAAGACAACTCCAATTTCTCAACTTAGCTGACAATAATTTGACAGTAATTGATGATTCTCTTCAATTCAACTTCCTTACTTCACTTACAAGTTGCAGATATCTGAAATATCTTGAAGTATCAGGGAATAGTTTACCATCAAAACTTCCCAAGTCCATTGGAAACTTATCCGTAGAACACTTTCAGGCAGAATCTTGTGGAATTATTGGAAATATTCCACTAGAAATCAGAAACATGAGCAACCTTATTGGATTATCTTTGAGGGATAATGATTTAAATGGATCAATCCCTGGTGTAATTAAAGGGTTACATAAACTTCAATATTTAGATCTTGGTTACAATGGACTGCAAGGATCCATGATTGATGAGCTTTGTGAAATTAAGAGTTTGAGTGTATTGTATTTATCAAGCAATAAGCTTTCTGGAGTGTTACCAACATGTTTGGGAAATATGACTTCTCTTAGAAAGTTTCACATAGGATCTAATAGGTTAACCTCTGCGATACCTTCCTCATTTTGGAATCTCGGAGATATTTTAGAGGTAAACGTATCCTCCAATGCTTTAATTGGAAAACTTCCACCTGAGATTAAGAATTTGAGAGCTGTTATACTGTTGGACTTGTCAAGAAATCAAATTTCAAGCAACATTCCAACATTCATAAGTTTCTTGACAACTTTAGAAACTTTTTCCTTAGCATATAACAAATTGAAAGGGCCTATCCCGACATCACTTGGTGAAATGCTAAGCTTGAGTTTCTTGGACTTGTCTCAAAATCTTCTTACTGGTGTGATCCCAAAATCCTTAGAGTCACTTTCTTATCTTAAATACGTTAACTTTTCATACAATAGATTGCAAGGAGAGATTCCTAATGGAGGGCCATTCAAAAAATTCACATTTGAATCTTTCATGAATAATGAAGCACTTTGTGGTAGTCCTCAGTTACAAGTACCTCCATGTGATAAACATAGGAAAAAATCAAAGATGTTATTAATCATATTGATATCATCCATAATTGCTGTGCTAGGCATTTTGGTTGTTGCATGCATAATACTTCGAATGCATAAAAGGAAAAAGGTTGACAGTCCACTTGAGAGGAGTTTATCCGCTCTAGGAGTTCCAAGAAGGATTTCCTATTATGAACTTGTGCAAGCAACTAATGGATTCAGTGACAGTAATTTACTTGGAAGAGGTGGTTTTGGATCCGTGTATAATGGAATGCTTTCTAGTGGGAAGATGATAGCAATTAAAGTACTTGACTTGACAATGGCAGAAGCATCAAGAAGCTTTGATGCAGAATGCAATGCAATGCGCAACCTTCGACATAGAAATCTAGTTCAAATTATGAGTAGTTGTTCAAATCCTGATTTCAAATCTCTAGTGATGGAGTTTATGTCAAATGGAAGTGTGGAAAGATGGTTATACTCTGATAACTATTTTTTGGATTTCTTGCAAAGGTTGAACATAATGATAGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGTAATGTGTTGCTGGATGAAGATATGGTTGCACATGTTAGTGATTTTGGGATTTCCAAGCTCTTGGATGAAGGACAATCAAAAACTCATACAGGGACTTTAGCTACTCTTGGCTATGTTGCACCAGAGTATGGATCTAGGGGGATCATTTCAGTTAAAGGAGATGTGTACAGCTATGGGATAATGCTAATGGAAATGTTCACCGGAAAGAAGCCAACAAATGAAATGTTTTCAGAAGAATTAACCTTGAAAACTTGGATTACTGAATCAATGGCGAATTCCAGTATGGAAGTTGTGGATTACAATTTAGGCTCACAACATGAGAAAGAAATTCATGATATCTTAGCTTTAGCATTGAGATGCTGTGAAGATTCACCTGAGGCTCGGATTAATATGACAGATGCAACTACCTCGTTAATCAAGATCAAGACCTCACTCATCCGATGA 3528 0.3571 MAKLYSFHSLLFILSASLYYYLFTCLAMISKTITTDEFALLAFKSSITLDPYDILSNWSISSSTSSFSSCNWVGVTCDEHHGRVNALDLNNMDLEGTISPQLGNLSFLVVLDLQGNSFYGELPHELLQLKRLKWLDLSDNDFVGEIPSRIGDLAKLHHLDLYFNNFVGAIPQSISDLSMLRYLDLSTNFIKGTIPHAIGQLGMLRILDIRNNKLCGILPTTISNMSSLEEIHLANNSLSGEIPKGIGDLTELNTVNLEDNLLTGNILMFNNTSLQYLYLGYNNMTGVLPSNVCQWLPNLRLLYLFHNDFSGEIPNVWRDCKELEDLQLSGNNFDKGRIPADIGKLIKLQVLYLAENNFEGEIPLSLFNISSLRVISLRSNNLNGTLPRSIGNCTFLQKLYFTNNFFTGSIPKEIGHLNQLQLLFMKNNSLSGPIPSQVFNISTLKYLRLELNSFSGMLPSNFGFGLPNLQFLQMYGNKFVGKIPNTISNASNLFSVSFSDNEFSGIIPNSFGDLRQLQFLNLADNNLTVIDDSLQFNFLTSLTSCRYLKYLEVSGNSLPSKLPKSIGNLSVEHFQAESCGIIGNIPLEIRNMSNLIGLSLRDNDLNGSIPGVIKGLHKLQYLDLGYNGLQGSMIDELCEIKSLSVLYLSSNKLSGVLPTCLGNMTSLRKFHIGSNRLTSAIPSSFWNLGDILEVNVSSNALIGKLPPEIKNLRAVILLDLSRNQISSNIPTFISFLTTLETFSLAYNKLKGPIPTSLGEMLSLSFLDLSQNLLTGVIPKSLESLSYLKYVNFSYNRLQGEIPNGGPFKKFTFESFMNNEALCGSPQLQVPPCDKHRKKSKMLLIILISSIIAVLGILVVACIILRMHKRKKVDSPLERSLSALGVPRRISYYELVQATNGFSDSNLLGRGGFGSVYNGMLSSGKMIAIKVLDLTMAEASRSFDAECNAMRNLRHRNLVQIMSSCSNPDFKSLVMEFMSNGSVERWLYSDNYFLDFLQRLNIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDEDMVAHVSDFGISKLLDEGQSKTHTGTLATLGYVAPEYGSRGIISVKGDVYSYGIMLMEMFTGKKPTNEMFSEELTLKTWITESMANSSMEVVDYNLGSQHEKEIHDILALALRCCEDSPEARINMTDATTSLIKIKTSLIR* 1176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0516 1175 SMART LRR_typ_2 296 319 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 417 441 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 514 537 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 370 393 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 153 177 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 345 369 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 201 224 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 105 129 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 640 663 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 760 783 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 712 736 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 225 249 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 616 639 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 664 687 IPR003591 -
Mtr2g0516 1175 SMART LRR_typ_2 466 490 IPR003591 -
Mtr2g0516 1175 SUPERFAMILY Protein kinase-like (PK-like) 880 1166 IPR011009 -
Mtr2g0516 1175 ProSitePatterns Protein kinases ATP-binding region signature. 907 929 IPR017441 GO:0005524
Mtr2g0516 1175 ProSiteProfiles Leucine-rich repeat profile. 516 537 IPR001611 GO:0005515
Mtr2g0516 1175 SMART serkin_6 901 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0516 1175 Gene3D Ribonuclease Inhibitor 387 533 IPR032675 -
Mtr2g0516 1175 SMART LRR_sd22_2 616 639 - -
Mtr2g0516 1175 SMART LRR_sd22_2 640 666 - -
Mtr2g0516 1175 SMART LRR_sd22_2 153 179 - -
Mtr2g0516 1175 SMART LRR_sd22_2 201 227 - -
Mtr2g0516 1175 SMART LRR_sd22_2 417 443 - -
Mtr2g0516 1175 SMART LRR_sd22_2 760 786 - -
Mtr2g0516 1175 SMART LRR_sd22_2 545 571 - -
Mtr2g0516 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 155 291 - -
Mtr2g0516 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 370 1172 - -
Mtr2g0516 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 299 388 - -
Mtr2g0516 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 7 156 - -
Mtr2g0516 1175 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 203 333 - -
Mtr2g0516 1175 SUPERFAMILY L domain-like 577 826 - -
Mtr2g0516 1175 Pfam Leucine rich repeat 642 701 IPR001611 GO:0005515
Mtr2g0516 1175 Pfam Leucine rich repeat 155 214 IPR001611 GO:0005515
Mtr2g0516 1175 Pfam Protein kinase domain 902 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0516 1175 SUPERFAMILY L domain-like 269 566 - -
Mtr2g0516 1175 ProSiteProfiles Protein kinase domain profile. 901 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0516 1175 Gene3D Ribonuclease Inhibitor 193 293 IPR032675 -
Mtr2g0516 1175 Gene3D Phosphorylase Kinase; domain 1 884 976 - -
Mtr2g0516 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 291 - -
Mtr2g0516 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 203 333 - -
Mtr2g0516 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 370 1172 - -
Mtr2g0516 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 156 - -
Mtr2g0516 1175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 299 388 - -
Mtr2g0516 1175 Gene3D Ribonuclease Inhibitor 534 841 IPR032675 -
Mtr2g0516 1175 Pfam Leucine rich repeat N-terminal domain 35 78 IPR013210 -
Mtr2g0516 1175 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Mtr2g0516 1175 Gene3D Ribonuclease Inhibitor 294 386 IPR032675 -
Mtr2g0516 1175 SUPERFAMILY L domain-like 63 357 - -
Mtr2g0516 1175 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1020 1032 IPR008271 GO:0004672|GO:0006468
Mtr2g0516 1175 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515
Mtr2g0516 1175 Gene3D Transferase(Phosphotransferase) domain 1 977 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0516 Mtr-Chr2 5123447 5133358 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0516 21 1170 Receptor kinase-like Gene Family AT5G46330 33.144 1.38e-180 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr2g0516 Pkinase 2.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0516 - K13420 mtr:MTR_6g040210 1292.72