Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0513 ATGGCCAAGTTATACTCTTTTCACTCTTGCCTCTGTATTCTCTCTACTTCACTCTATTATTATTTCTTCACTTGCTTAGCTATAAGTAGTAAAAAAAACATCACCACAGATGAATTTTCACTTCTTGCATTCAAATCCTCAATTACCTTAGATCCTTATCATATGCTTAGAAATTGGTCAATTTCCTCTTCTACTTCTTCTTTCTCTTCATGCAATTGGGTTGGTGTTACTTGTGATGAACATCATGGAAGAGTAAATGCATTGAATCTTAGTAACATGGACCTTGAAGGTACAATTTCCCCTCAATTGGGAAATCTCTCTTTCCTTGTATTTCTTGATCTACAAGGAAATAGTTTCCATGGTGAGTTACCACATGAGTTACTTCAGTTGAAGAGATTGAAATTGTTGAATTTGAGCAACAATGATTTTGTTGGAGAAATTCCTTCAAGGATAGGGGACTTATCAAAACTTCAACAATTGGATATTCGGCAAAACAATATTGTTGGAGTTATTCCTCAATCTATATCCAACTTGTCAATGTTAGAATATCTAAATTTGAAATCAAATCACATCAAAGGAACCATTCCACATGCCATTAGTCAACTTGGTATGTTGAGGATTTTGGATATTAGAAATAACAAGCTCTCTGGAATCCTACCAACAACAATATCCAACATGTCTTCACTTGAAGAAATTCATTTAGCAAACAACTCTTTATCTGGTGAAATTCCTAAAGGAATTGGTGATCTTACACAACTGAGAACGGTAAACCTTCAACGCAATTTTCTCTCAGGCAACATATTATCGACATTAATGTTCAACAGCTCATCGTTGCAAAATTTGGCACTTGGTTTTAATAATCTGACTGGCATTCTTCCATCAAATGTTTGTCAAGGACTTCCAAACCTTAGATTACTTTATCTTTATGTTAATGATCTTTCTGGTGAGATGCCAAATGTTTGGCATTATTGCAAAGAGTTGGAAGAATTGATACTATCTTTCAATAATTTTGACAAAGGACATATGCCAGCTGACATTGCAAACTTGCCAAAGCTTCAATCTTTGTATCTTATTAGCAACAACTTGGAGGGTGAAATTCCTGTATCCCTCTTCAGCATCTCTTCTTTGAGAGAGATCAGCCTTGATGGTAACAATTTAAATGGAACTCTTCCAGACGAGATGTGTCATCAACTTCCTCAACTTGAAATATTTACTCTACTCGGTAATCATTTAGAAGGAGCCATTCCACGATCGATTGGCAACTGCACATTGTTACAAACGTTAACTTTACAGGATAACTTTTTTTCAGGTTCGATACCAATGGAGATTGGCAGTCTCAATCAACTTCAGCTTCTACAAATGGGAAATAACAGCTTGAGCGGACCTATTCCTTTGAAAATCTTCAACATTTCAACATTGGAATATTTGCATCTTGAACAAAATTCTTTCTCAGGCATGCTTCCATCAAATCTGGGATTTGGCCTTCCTAACCTACAGCAACTACACATGTACGGAAACAAGTTTGTTGGAAAAATTCCAAATAGTATATCCAATGCTTCAAATCTCGTCATAATTGACTTGAGTTCAAATCAATTTAGTGGAATCATACCCAACTCATTTGGAGATTTAACATTCCTCGAATCACTCGTCCTAGGTGGCAATAATTTGACAACAGATGATTCTCTTGAATTCAACTTCCTAACTTCACTGACTAGTTGCAGATATTTGAAACATCTTGAAGTATCCGAGATGATCAACTTACAATTAAAACTTCCCAAGTCCATTGGAAACTTAACTTTAGAACACTTTTGGGCAAATTCTTGTGGAATGAATGGAAATATTCCACTAGAAATCGGAAACATGAGCAACCTGATTCGATTATCTCTTAGTAGGAACAATATAAATGGATCGATCCCAAAGACTGTTAAAGGGTTACAAAAACTTCAGTCTTTGGATCTTGACTACAATGACCTGCAAGGATCCATCATTGATGAGCTTTGTGACATTACGAGTTTGAGTGAGTTGAATTTAACAAGCAATAAGCTTGTAGGAGTGTTACCGACATGTTTGGGAAATATGACTTCTCTTAGAAAGTTTTACATAGGATCTAATAGGTTAGCCTCTGAGATACCTTCCTCATTTTGGAATCTCAATGATATCTTAGAGGTAAACTTGTCCTCCAATGCTTTAACTGGAATTATTCCACCTGAGATTAAGAATTTTAGAGCTCTTATACTGTTAGATTTGTCAAGAAATCAAATTTCAAGCAACATTCCGGCAACCATAAGTTTCTTGAGAACTTTAGAAACTCTGTCCTTGGCAGATAACAAATTGAAAGGGCTAATTCCAGAATCACTTGGTGAAATGGTAGGCTTGAGTTTCTTGGACTTGTCTCAAAATCTTCTTACTGGTGTGATCCCAAAATCCTTAGAGTCACTTTCTTATCTTAAATACATTAACTTTTCATACAATAGATTGCAAGGAGAGATTCCTAATGGAGGGCCATTCAAAAAATTCACATTTGAATCTTTCATGAATAATGAAGCACTTTGTGGTAGTCCTCAGTTACAAGTACCTCCATGTGATAAACAAATTAGGAAAAAATCCAAAACAAAGATGTTATTAATTGTATGCATATCATCCATAATTGTTGTGTTGGGCATTTTGGCTATTGCATGCATAGTACTTCAAATGCACAAAAAGAAAGAAGTTGAAAATCCACTTGAAAAAGATTTATCAACAAATTTAGGGCTTTTAAAAAGGATTTCCTATTCTGAACTTGTGCAAGCAACTAATGGATTTAGTGAGACTAATTTACTAGGAAAGGGTGGCTTTGGATCTGTGTATCAAGGAATGCTTTCTAGTGGGAAGATGGTAGCAATTAAAGTACTTGACTTGAAATTGGAAGCAACAACAAAAAGCTTTAATGCAGAATGCAATGCTATGCGCAATCTTCGGCATCGAAATCTTGTTGAGATCATCACCAGTTGTTCAAATGTTAATTTCAGGTCTTTGGTAATGGAGTTAATGTCAAATGGAAGCTTGGAAAAATGGTTATACACTGATAACTATTTTTTAGGTTTCTTGCAAAGATTGACTATAATGATAGATGTGGCATCTGCATTGGAGTATCTTCATCATGGTTCTTCAATACCAGTGGTTCATTGTGATTTGAAGCCTAGCAATGTGTTACTGGATGAAAATATGGTTGCACATGTTAGTGATTTTGGGATTTCAAAGCTCTTGGATGATGGACAATCTAAAGCTCATACTCAGACTTTAGCTACAATTGGTTATGTTGCACCAGAGTATGGATCTAAGGGAGTAATTTCAGTTAAAGGAGATGTGTATAGCTTTGGAATAATGCTAATGGAAATCTTCACAGGAAAGAAGCCAACAGATGAAATGTTTGCAGAAGAATTAACCTTGAAAACTTGGATTAGTGAATCAATACACAATTCAGTTATGGAAGTTGTGGATTCAAAATTAGTCTCACAGCATGGGAAAGAAATTCATGAACTTTTAGCTCATGTATCCTCTATTTTTGTTTTAGCATTGAGGTGTTGTGAAGATTTACCTGAGGCAAGAGTTAATATGACAGATGTAACTGCATCATTAGTAAAAATCAAGACCTTATTCACTCAATGA 3648 0.3525 MAKLYSFHSCLCILSTSLYYYFFTCLAISSKKNITTDEFSLLAFKSSITLDPYHMLRNWSISSSTSSFSSCNWVGVTCDEHHGRVNALNLSNMDLEGTISPQLGNLSFLVFLDLQGNSFHGELPHELLQLKRLKLLNLSNNDFVGEIPSRIGDLSKLQQLDIRQNNIVGVIPQSISNLSMLEYLNLKSNHIKGTIPHAISQLGMLRILDIRNNKLSGILPTTISNMSSLEEIHLANNSLSGEIPKGIGDLTQLRTVNLQRNFLSGNILSTLMFNSSSLQNLALGFNNLTGILPSNVCQGLPNLRLLYLYVNDLSGEMPNVWHYCKELEELILSFNNFDKGHMPADIANLPKLQSLYLISNNLEGEIPVSLFSISSLREISLDGNNLNGTLPDEMCHQLPQLEIFTLLGNHLEGAIPRSIGNCTLLQTLTLQDNFFSGSIPMEIGSLNQLQLLQMGNNSLSGPIPLKIFNISTLEYLHLEQNSFSGMLPSNLGFGLPNLQQLHMYGNKFVGKIPNSISNASNLVIIDLSSNQFSGIIPNSFGDLTFLESLVLGGNNLTTDDSLEFNFLTSLTSCRYLKHLEVSEMINLQLKLPKSIGNLTLEHFWANSCGMNGNIPLEIGNMSNLIRLSLSRNNINGSIPKTVKGLQKLQSLDLDYNDLQGSIIDELCDITSLSELNLTSNKLVGVLPTCLGNMTSLRKFYIGSNRLASEIPSSFWNLNDILEVNLSSNALTGIIPPEIKNFRALILLDLSRNQISSNIPATISFLRTLETLSLADNKLKGLIPESLGEMVGLSFLDLSQNLLTGVIPKSLESLSYLKYINFSYNRLQGEIPNGGPFKKFTFESFMNNEALCGSPQLQVPPCDKQIRKKSKTKMLLIVCISSIIVVLGILAIACIVLQMHKKKEVENPLEKDLSTNLGLLKRISYSELVQATNGFSETNLLGKGGFGSVYQGMLSSGKMVAIKVLDLKLEATTKSFNAECNAMRNLRHRNLVEIITSCSNVNFRSLVMELMSNGSLEKWLYTDNYFLGFLQRLTIMIDVASALEYLHHGSSIPVVHCDLKPSNVLLDENMVAHVSDFGISKLLDDGQSKAHTQTLATIGYVAPEYGSKGVISVKGDVYSFGIMLMEIFTGKKPTDEMFAEELTLKTWISESIHNSVMEVVDSKLVSQHGKEIHELLAHVSSIFVLALRCCEDLPEARVNMTDVTASLVKIKTLFTQ* 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0513 1215 SUPERFAMILY L domain-like 349 489 - -
Mtr2g0513 1215 ProSiteProfiles Protein kinase domain profile. 934 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0513 1215 Pfam Leucine rich repeat 156 215 IPR001611 GO:0005515
Mtr2g0513 1215 Pfam Leucine rich repeat 766 826 IPR001611 GO:0005515
Mtr2g0513 1215 Pfam Leucine rich repeat 671 730 IPR001611 GO:0005515
Mtr2g0513 1215 Pfam Leucine rich repeat 620 658 IPR001611 GO:0005515
Mtr2g0513 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 155 296 - -
Mtr2g0513 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 401 1213 - -
Mtr2g0513 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 203 337 - -
Mtr2g0513 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 15 156 - -
Mtr2g0513 1215 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 303 421 - -
Mtr2g0513 1215 Gene3D Ribonuclease Inhibitor 197 297 IPR032675 -
Mtr2g0513 1215 Gene3D Ribonuclease Inhibitor 298 394 IPR032675 -
Mtr2g0513 1215 ProSitePatterns Protein kinases ATP-binding region signature. 940 962 IPR017441 GO:0005524
Mtr2g0513 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 15 156 - -
Mtr2g0513 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 303 421 - -
Mtr2g0513 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 401 1213 - -
Mtr2g0513 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 155 296 - -
Mtr2g0513 1215 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 203 337 - -
Mtr2g0513 1215 Pfam Leucine rich repeat N-terminal domain 36 79 IPR013210 -
Mtr2g0513 1215 Pfam Leucine Rich Repeat 521 541 IPR001611 GO:0005515
Mtr2g0513 1215 Pfam Protein kinase domain 935 1202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0513 1215 SUPERFAMILY Protein kinase-like (PK-like) 916 1206 IPR011009 -
Mtr2g0513 1215 Gene3D Phosphorylase Kinase; domain 1 904 1009 - -
Mtr2g0513 1215 Gene3D Ribonuclease Inhibitor 395 561 IPR032675 -
Mtr2g0513 1215 SMART serkin_6 934 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr2g0513 1215 SMART LRR_typ_2 621 644 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 226 250 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 669 692 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 202 225 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 520 542 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 789 812 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 765 788 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 154 177 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 543 566 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 276 299 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 374 397 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 398 422 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 693 716 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 495 519 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 106 130 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 300 323 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 349 373 IPR003591 -
Mtr2g0513 1215 SMART LRR_typ_2 178 201 IPR003591 -
Mtr2g0513 1215 Gene3D Transferase(Phosphotransferase) domain 1 1010 1214 - -
Mtr2g0513 1215 SUPERFAMILY L domain-like 64 389 - -
Mtr2g0513 1215 SUPERFAMILY RNI-like 494 832 - -
Mtr2g0513 1215 Gene3D Ribonuclease Inhibitor 34 196 IPR032675 -
Mtr2g0513 1215 Gene3D Ribonuclease Inhibitor 562 870 IPR032675 -
Mtr2g0513 1215 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1053 1065 IPR008271 GO:0004672|GO:0006468
Mtr2g0513 1215 SMART LRR_sd22_2 543 564 - -
Mtr2g0513 1215 SMART LRR_sd22_2 621 647 - -
Mtr2g0513 1215 SMART LRR_sd22_2 765 786 - -
Mtr2g0513 1215 SMART LRR_sd22_2 789 815 - -
Mtr2g0513 1215 SMART LRR_sd22_2 154 180 - -
Mtr2g0513 1215 SMART LRR_sd22_2 202 228 - -
Mtr2g0513 1215 SMART LRR_sd22_2 693 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0513 Mtr-Chr2 5091961 5096886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0513 475 831 Receptor kinase-like Gene Family AT3G47570 29.056 1.18e-30 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mtr2g0513 Pkinase 5.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0513 - K13420 mtr:MTR_6g040210 1247.65