Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0512 ATGGGTCTAGATGAGAGTGAAGTTAGAGTTGAGGTTTTGGATTCGGTCCGTGACGTGATTGATGAGAATTTGAGTAATTTGCTTGAAGGGGTTGGAGAAGTTGGAACTTCAAGAGAGGTTGATAATGATTCTGGATCCAATAAGGTGGAGGATGAGGAAGTTAAGGTTCAGGAAAAGTGTGATGAATTGGTTATGGTTGATCAAGGAACTAGTTGTAATTCAAGCAATTTGGTGAATCAAGAAGTGGTTGAGAGAGTGATTGTAATAGAGTCTGCTCATGTTCAGAATCAGTGTGTTAATGGAGAGGAGAGGAAATTAGAAGCAAAAGCTGATGAGTCAGGGCTTAGTTTGGTTTCGATGAAAGTGCCGAAAGGGGTGTCTGAAACTGATAAAGATTTATGTGTGATTGATATGAAGTGTAGCAGCCACAAAGGGTTTTATGAGAGTTCACAAGGTGAAAGGGTTTGTAGGATTTGTCATCTGGCTTTTGGGCAGGCATCGGATGCAACGGCTGTTGAAAATGCTAGTGCTGCAAATGGAGATTTAATTCAGCTCGGTTGTGCTTGTAAAGATGAGCTTGGCATTGCACATGTTCATTGTGCTGAGGTGTGGTTCAAGCTTAAGGGAAACAGGTTATGCGAAATATGCGGCGAGACTGCAAAAAATGTTTCGGGTGTTGCCAGTAATGGATTTATGGAAGAGTGGAATGATAGAAGATTCATGGAAAATGACGATAACTCATCCCGCAGGTTTGGTGGATGCTGGCGAGGACAGCCATTTTGTAATTTCTTAATGGCGTGCCTGGTAATAGCTTTCATTCTGCCATGGTTTTTTCATGTAGATATGTTCTAG 852 0.4167 MGLDESEVRVEVLDSVRDVIDENLSNLLEGVGEVGTSREVDNDSGSNKVEDEEVKVQEKCDELVMVDQGTSCNSSNLVNQEVVERVIVIESAHVQNQCVNGEERKLEAKADESGLSLVSMKVPKGVSETDKDLCVIDMKCSSHKGFYESSQGERVCRICHLAFGQASDATAVENASAANGDLIQLGCACKDELGIAHVHCAEVWFKLKGNRLCEICGETAKNVSGVASNGFMEEWNDRRFMENDDNSSRRFGGCWRGQPFCNFLMACLVIAFILPWFFHVDMF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0512 283 Pfam RING-variant domain 156 216 IPR011016 GO:0008270
Mtr2g0512 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 228 IPR013083 -
Mtr2g0512 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 55 283 - -
Mtr2g0512 283 PANTHER ZINC FINGER, RING-CH-TYPE 55 283 - -
Mtr2g0512 283 SUPERFAMILY RING/U-box 151 219 - -
Mtr2g0512 283 SMART ringv_2 155 217 IPR011016 GO:0008270
Mtr2g0512 283 ProSiteProfiles Zinc finger RING-CH-type profile. 148 223 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0512 Mtr-Chr2 5084707 5087621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0512 136 282 C3H Transcription Factor Family AT5G05830 40.789 2.27e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0512 - - gmx:100776373 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0512 2 5084707 5087621 Mtr2g0512 2 5084707 5087621 ECH
Mtr8g2936 8 39985853 39989018 Mtr2g0512 2 5084707 5087621 PCT