Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0493 ATGCCGGATTTTCACCACGATTCTCTCACACCACCGTCACGCACCGTCCCCGTCCGCGAGGATTGTTGGTCTGAAGATGCTTCTTCTACTCTCGTCGATGCATGGGGTCGTCGGTATCTTGAACTCAACCGTGGTAATCTTCGTCAGAAAGATTGGCAAGATGTTGCTGATGCTGTTAACGCTCTTCATGGTCATACAAAGAAAACTCATCGCACAGATGTTCAGTGTAAGAATCGAATCGATACGATTAAGAAAAAGTACAAGGTTGAAAAGGCTAGGGTTACGGAATCTAATGGTGTTTTGCATTCTAATTGGCCTTTTTTTGAACGGTTAGATGTTTTGATTGGACCTAATTTCAGTTCTAAGAAGTTATCAATTTCTTCACCAGGGGCGGTGACACCGTCGCCTCCGGTAGCTCTTCCGTTGATTCCTCATCGGAAATTTGCTAATTCTGGTGGTTATTCATCACCTGCAATTGCGGTACATTCGACTGCGGTGGCTCTCCCACAGAAGAGGAATTATTCTGCGGTGGCTGCGGCTACGGTGAATGTGATGGATGATGGGTATTTTAGGAGGAATTATTCTGCCGTAGCTGCGGCCGCTGCTGCCGCGGAAGCTGATGAGGATGATGATGAGGATGATGAGGTGGAAGAAGTTGAGGAAGAAGATGTGGAAGTAGAGGAAGAGGAAGGGAGGAGGAGTGAAGTGGATGAAGGGGATAAAGGGAGAGAAGGGATGAAGAGATTGGCGAAGGCAATAGAGAGTTTTGGTGAAATGTATGAGAGAGTGGAAGAACAGAAACTGAGGCAGATGGTGGATTTGGAGAAACAAAGGATGCAATTTGCTAAAGATCTTGAGGTGCAGAGGATGCAGATGTTTATGGATACTCAAGTTCAGCTGGAGAGAATCAAGCGGGGAAAACCCTCTGGGTCTAATGATATGTATAATAGCTAG 954 0.4612 MPDFHHDSLTPPSRTVPVREDCWSEDASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTESNGVLHSNWPFFERLDVLIGPNFSSKKLSISSPGAVTPSPPVALPLIPHRKFANSGGYSSPAIAVHSTAVALPQKRNYSAVAAATVNVMDDGYFRRNYSAVAAAAAAAEADEDDDEDDEVEEVEEEDVEVEEEEGRRSEVDEGDKGREGMKRLAKAIESFGEMYERVEEQKLRQMVDLEKQRMQFAKDLEVQRMQMFMDTQVQLERIKRGKPSGSNDMYNS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0493 317 Coils Coil 246 266 - -
Mtr2g0493 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 312 IPR044823 -
Mtr2g0493 317 MobiDBLite consensus disorder prediction 204 233 - -
Mtr2g0493 317 PANTHER OS05G0560600 PROTEIN 10 312 - -
Mtr2g0493 317 Pfam Myb/SANT-like DNA-binding domain 20 113 IPR044822 -
Mtr2g0493 317 Gene3D - 23 89 - -
Mtr2g0493 317 MobiDBLite consensus disorder prediction 202 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0493 Mtr-Chr2 4889734 4894357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0493 19 317 Trihelix Transcription Factor Family AT3G14180 33.708 1.36e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mtr2g0493 Myb_DNA-bind_4 7.6e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0493 - - mtr:MTR_2g016140 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0493 2 4889734 4894357 Mtr2g0493 2 4889734 4894357 ECH