Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0482 ATGTCAAATACTTCATCGTCTTCTTCTATTTGGGTACTCTCTAACATAAAGCTTCAATTCTTTACTCGTATCAAACGGTTTCTTCAATCCAAAGCAACCCGAAAGCGCTGTGAATCCTCCGATTATTTAAACAAAGAAAAAAGCAGAGCTGAACAGAGCAACATTGAACAGAACATGGTTGAAAATATTGAAACAGTGCAAGTTATAGAGAAGCATAAGGAGGAGGAGGAGGTGGTGGAAGAAACTGAAATTTTGCTGCAAAAGACAGTGAAGATGCTTCACTTTGGAAGCTGGGAAGAGAAGGAGATAGCTGCAAAAGAGATTGAAAGTTTAGTTAAAGAAGATGTTAAGGTTAGAAAGTTGATAACAGAACTTGGAGTGGTGCCGGTTTTGGTATCTATGGTGGCGTCACAGGTGGTTAGTCACCGGAGAGCAGGGTTGACGGCGTTGATTTACCTAGCTGATGGAACTTACACGAACAAGGCTATGATAGTGGAGGCAGGAATACTATCCAAATTACCTAAGACAATTGACCTTGTAGATGAGTCAACCATAAGTGAGTTTGCAGAGTTACTTTTATCATTATCATCACTTGCAAACACTCAATACCCTTTTCCTTCATTAGATTTCCTTCCAGTTATTAAAGACATTCTTAAAAAAGACATGACTTTTGATACCAAAAGATCATGTTTAGGAGCCTTGTACAACCTTTCAACAATGTTAGAAAATGCAAGCCCTTTAGTTTCTTATGGTCTTGTCCCAATCCTCTTAGAACTTTCTTTAGTCAAAGAAATTTCAGAAAAAGCTCTTGCTACTTTAGGTAACTTGTTGGTCACGTTAATGGGTAAAAAAGCAATAGAGAACAACTCAATGGTGCCACAAAATTTTGTTGAGATTTTGTCATGGGAAGATAAACCAAAATGTCAAGAGTTGTCGGTTTATATTTTGATGATTTTAGCACATCAAAGTTCATCACAAAGAGATAAAATGGCACAAGCTAGGATTGTTCCTATACTTCTTGAAGTTGTTTTATTGGGGAGTCCTTTAGCTCAAAAGAGAGCAATGAAACTATTGCAATGGTTTAAGGATGAAAGACAAATAAAGATGGGACCACATTCTGGTCCACAAACACCAAGATTTGGAATGGGGTCACCATTAAATCAAAGAGATACAAATGAAGGGAAGAAATTGATGAAGAGTTTGGTGAAACAAAGCTTGCATAAGAATTTGGAAATAATAACTCAAAGGGCAAATGCAAATGGGGAGTCCTCCAAACTCAAGTCATTGGTTATTAGCACAAGTTCCAAGAGCTTGCCTTATTAA 1323 0.3734 MSNTSSSSSIWVLSNIKLQFFTRIKRFLQSKATRKRCESSDYLNKEKSRAEQSNIEQNMVENIETVQVIEKHKEEEEVVEETEILLQKTVKMLHFGSWEEKEIAAKEIESLVKEDVKVRKLITELGVVPVLVSMVASQVVSHRRAGLTALIYLADGTYTNKAMIVEAGILSKLPKTIDLVDESTISEFAELLLSLSSLANTQYPFPSLDFLPVIKDILKKDMTFDTKRSCLGALYNLSTMLENASPLVSYGLVPILLELSLVKEISEKALATLGNLLVTLMGKKAIENNSMVPQNFVEILSWEDKPKCQELSVYILMILAHQSSSQRDKMAQARIVPILLEVVLLGSPLAQKRAMKLLQWFKDERQIKMGPHSGPQTPRFGMGSPLNQRDTNEGKKLMKSLVKQSLHKNLEIITQRANANGESSKLKSLVISTSSKSLPY* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0482 440 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 78 440 - -
Mtr2g0482 440 SUPERFAMILY ARM repeat 87 360 IPR016024 -
Mtr2g0482 440 Gene3D - 285 361 IPR011989 -
Mtr2g0482 440 Gene3D - 85 284 IPR011989 -
Mtr2g0482 440 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 78 440 - -
Mtr2g0482 440 MobiDBLite consensus disorder prediction 369 391 - -
Mtr2g0482 440 SMART arm_5 157 197 IPR000225 GO:0005515
Mtr2g0482 440 SMART arm_5 115 155 IPR000225 GO:0005515
Mtr2g0482 440 SMART arm_5 239 278 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0482 Mtr-Chr2 4775503 4779307 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0482 46 378 U-box Gene Family AT1G67530 27.429 5.54e-19 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0482 - - gmx:100813828 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0482 2 4775503 4779307 Mtr2g0482 2 4775503 4779307 ECH