Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0451 ATGAAGTTTTCTGCTCAAACTTGGAGGAATTCAGTTCCAAATCTTTTGCTATGGCTTCCTCTAATAATCTCACTTCTTTTATTCCAATGTCTTGCTAATAGTTCCCAAACTACAACAAGTGTTGGTGTGATCATTGATGTTAATTCTGAAATAGGGAAAAACCAGAAAACAGCTATGCAAATTGCAGCTCAAAGTTTCAATAATTATTCCAACAATCATAACATAATCCTTTTCTTCCGTGACTCTGGTAAAAACCCTTTACAAGCAGCTTCAGCTGCTGAAGATTTAATTACTAAAGAGAAAGTTAAAGTCATTATTGGCATGGAAACATGGCAAGAAGCTGCTATTGTTGCTGACTTTGGAGCCAAGTTTCAAATACCAACAATTTCATTTTCTTCTCCTCCGTTAGTCTCTTCATCATCAATGCAATTTCGTTGGCCTTTCTTGATTCAAATGGCTCAAAATCATTCTGCACAAATGAACTTCTTAGCTGATATTGTCCATGGTTTCAACTCTCAAAAAGTTATAGCTATATATGAAGACAATCCTTATAGTAGTGATTTTGGAATGTTAAACCTCTTATCGGAGGCTCTCGAAAAGGTTAACTCGAAGATTGAGTATCGATTAGTTCTTCCACCATTCACTTCTTTATCAGATCCAAAAGGGTTTGTTCTTGATGAACTGTTGAAGTTGTTGCGGCTAAAATCTCGTGTTTTTATTGTACTTCAAGCATCATTACCTATGGTGAACCATTTGTTTAGAGAAGCTAAGAAAATTGGATTGTTGGAGAAAGAATCAACTTGGATAATCAATGAGGAGATTACAAGCATGTTAGACTCTGTAGATACATCTGTTTTATCTTCCATGGAAGGTGTTATGGGAATCCAAATCAACTATTCTACAAGTTCTAGTGCGTATACTCAATTGCAGGAAAATTTCCAAGACGAGCATACAGAAACAGTTGAGTCCAAACCAGGATCAAATACTTTGCTAGCTTATGATGGCATTTCAGTTTTTACGAAGGCTTTGGAGAAAATGAATACTAATTTTAGTAGCTCAAAGACGTTGTTGGAGGAAATGTTATCTTCCAATTTCAATGGTTTAAGTGGTAATATAAAATTCAAAGAAAGACAACTATCCTATACTCCAATGTTAGAAGTTTTTAAAGTGATGAATAATGCCAAGAAACATTTTGAGTTTGACTCTTGGACACCAAATTTGAAGTTTTCTAGATCTCTTAAAGAGAGCACAAGTGATGGTACTACAGAAACTAAGACATGGAAAGTACCTACTGATGCAAACCCTTTAAAAGTTGCACTTCCTACGAATCCTGCTTTTGATAACTTTTTGAAATTCTCCCAAAATCAACCTCCTACCGGTTTTTGTATTCAACTTTTCAAAGATATCAGAGAAATTTTGAGTGATCAATATTCTGATCTTCCCTATGAATTTTACTACGACTTCAATGGATCTTATGATGCACTTCTGGATAAAGTCATAGATGAGTCCTATGATGCTATTGTAGGAGATGTAACAATACTTGCCAACCGATCAAAGAATGTATCATTCACTCAACCATATACCGAGTCAGGCCTATCACTCATACTTCCAGCAGAGAGTGATGATTCAGCATGGTTGTTTATGAAGCCATTTAGCACAGAAATGTGGATTACTACTGTTGGTATCCTCATCTACACAATGATAATCATTTGGTTCTTGGAACATCACTTGAATCCTGAATTTGGTGGAACAGTGAAAACCCAGATCAGCACCACTATGTGGTTTGCTTTTACTTCTCTATTTTTTGCTCATAAGGAGAAAATAAGCACCAACTCAGCAAGAGTAGTAGTTGGAGTATGGTTATTTCTCGTGTTTGTTATAACCTCAAGTTACACTGCAAATCTTTCATCATTGCTTACTGTCCAAAAATTGAAGTCTGCCAGAGACATTGAATGGCTTATACAAAACAAACTACCAGTTGGTTGTGATAACAGTAGTACCTTTGTAAAGAACTACTTGGTCCAAGTGTACAATTTTCCTAGGCAACAAGTTGTAGATGTTGACAATGAACAAGACATTGTGGAAAAGTTCAAGAGCAAACAAATTTCTGCTCTCTTTATTGAAAGCCCATATGAGAAGGTTTTCTTGAATAAATACTGCAAAGATTACACTGCAACTACAGCAGCATATAAATTTGGAGGAATGGGATTTGTATTTCAAAAAGGGGCTCCAATAGCAAGAGACTTTTCTGAAGCAATTTTAACACTAGCAGAAAATGGAAACCTAAAACATTTGGAAGAGACTTGGTTAACACCTTCTACTGAATGCTCAACCAACTCAGCATCTCCAGAAACGGAGAGTCTGACCCTTGCCAAATTCTTGGGACTATATATCATATGTGCTGCCACTTCCACCATCTGCATATTACTAGCTTTATTGAGGAAATATTTCCATAACCATAATCACTATGATGAGCAAGCTCAACTTCCTCAAGGAAATGTAATTGCCGAATCTGATGATGAAAATAATAACAATGACATGAAGAGATCAATTAGAAATGGTACAGGCCTGTACAATGGGAATCTCATCATGACATTAAATAAAGCTGCCTCTTTTGGTGGATCTGTATTACAAGGTATACGTCATCGAAATTCACCAAGGCAGGAGAATGTAAGTGATTCTGATGAACCGATCAATCCACAACGATCCCAATCAGCTGTCATAGAAATGATATAA 2736 0.3607 MKFSAQTWRNSVPNLLLWLPLIISLLLFQCLANSSQTTTSVGVIIDVNSEIGKNQKTAMQIAAQSFNNYSNNHNIILFFRDSGKNPLQAASAAEDLITKEKVKVIIGMETWQEAAIVADFGAKFQIPTISFSSPPLVSSSSMQFRWPFLIQMAQNHSAQMNFLADIVHGFNSQKVIAIYEDNPYSSDFGMLNLLSEALEKVNSKIEYRLVLPPFTSLSDPKGFVLDELLKLLRLKSRVFIVLQASLPMVNHLFREAKKIGLLEKESTWIINEEITSMLDSVDTSVLSSMEGVMGIQINYSTSSSAYTQLQENFQDEHTETVESKPGSNTLLAYDGISVFTKALEKMNTNFSSSKTLLEEMLSSNFNGLSGNIKFKERQLSYTPMLEVFKVMNNAKKHFEFDSWTPNLKFSRSLKESTSDGTTETKTWKVPTDANPLKVALPTNPAFDNFLKFSQNQPPTGFCIQLFKDIREILSDQYSDLPYEFYYDFNGSYDALLDKVIDESYDAIVGDVTILANRSKNVSFTQPYTESGLSLILPAESDDSAWLFMKPFSTEMWITTVGILIYTMIIIWFLEHHLNPEFGGTVKTQISTTMWFAFTSLFFAHKEKISTNSARVVVGVWLFLVFVITSSYTANLSSLLTVQKLKSARDIEWLIQNKLPVGCDNSSTFVKNYLVQVYNFPRQQVVDVDNEQDIVEKFKSKQISALFIESPYEKVFLNKYCKDYTATTAAYKFGGMGFVFQKGAPIARDFSEAILTLAENGNLKHLEETWLTPSTECSTNSASPETESLTLAKFLGLYIICAATSTICILLALLRKYFHNHNHYDEQAQLPQGNVIAESDDENNNNDMKRSIRNGTGLYNGNLIMTLNKAASFGGSVLQGIRHRNSPRQENVSDSDEPINPQRSQSAVIEMI* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0451 911 Gene3D - 705 778 - -
Mtr2g0451 911 SUPERFAMILY Periplasmic binding protein-like II 425 771 - -
Mtr2g0451 911 SUPERFAMILY Periplasmic binding protein-like I 37 461 IPR028082 -
Mtr2g0451 911 Pfam Ligand-gated ion channel 772 802 IPR001320 GO:0015276|GO:0016020
Mtr2g0451 911 MobiDBLite consensus disorder prediction 883 911 - -
Mtr2g0451 911 Gene3D - 545 676 - -
Mtr2g0451 911 Gene3D - 49 381 - -
Mtr2g0451 911 PIRSF IGluLR_plant 11 906 IPR017103 -
Mtr2g0451 911 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 908 - -
Mtr2g0451 911 Gene3D - 431 544 - -
Mtr2g0451 911 Gene3D - 155 302 - -
Mtr2g0451 911 PANTHER GLUTAMATE RECEPTOR 2 908 - -
Mtr2g0451 911 Pfam Receptor family ligand binding region 56 390 IPR001828 -
Mtr2g0451 911 SMART GluR_14 437 772 IPR001320 GO:0015276|GO:0016020
Mtr2g0451 911 Pfam Bacterial extracellular solute-binding proteins, family 3 455 771 IPR001638 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0451 Mtr-Chr2 4522682 4527832 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g0451 25 822 Ion Channels AT2G29120 30.986 1.32e-121 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0451 - - mtr:MTR_2g015290 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0451 2 4522682 4527832 Mtr2g0451 2 4522682 4527832 ECH